miRNEST 2.0, an integrative microRNA resource :: BLAST
>42480_ssp-MIR444c:mirbase
Length = 108
Score = 184 bits (93), Expect = 8e-48
Identities = 95/96 (98%)
Strand = Plus / Plus
Query: 1 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 66
Query: 61 ttttcttgcangttgtgcagttgttgtctcaagctt 96
|||||||||| |||||||||||||||||||||||||
Sbjct: 67 ttttcttgcaagttgtgcagttgttgtctcaagctt 102
>42086_osa-MIR444c:mirbase
Length = 138
Score = 121 bits (61), Expect = 1e-28
Identities = 87/96 (90%)
Strand = Plus / Plus
Query: 1 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 60
||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| |
Sbjct: 23 aagctagagacagcaactgcatatcttgcaagaaaatcggttttatggccataccgatga 82
Query: 61 ttttcttgcangttgtgcagttgttgtctcaagctt 96
|||||||||| | |||||||||||||||||||||||
Sbjct: 83 ttttcttgcaagctgtgcagttgttgtctcaagctt 118
>42085_osa-MIR444c:mirbase
Length = 138
Score = 121 bits (61), Expect = 1e-28
Identities = 87/96 (90%)
Strand = Plus / Plus
Query: 1 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 60
||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| |
Sbjct: 23 aagctagagacagcaactgcatatcttgcaagaaaatcggttttatggccataccgatga 82
Query: 61 ttttcttgcangttgtgcagttgttgtctcaagctt 96
|||||||||| | |||||||||||||||||||||||
Sbjct: 83 ttttcttgcaagctgtgcagttgttgtctcaagctt 118
>42084_osa-MIR444b:mirbase
Length = 138
Score = 87.7 bits (44), Expect = 1e-18
Identities = 81/94 (86%), Gaps = 6/94 (6%)
Strand = Plus / Plus
Query: 9 ggcagcaactgcatatcttgcaagaaaatt------ggttttcgaaccataccgataatt 62
||||||||||||| ||||||||||||||| | ||||| ||||||||||| |||
Sbjct: 27 ggcagcaactgcacatcttgcaagaaaatctttagggtttttcagaccataccgatgatt 86
Query: 63 ttcttgcangttgtgcagttgttgtctcaagctt 96
|||||||| |||||||||||||||||||||||||
Sbjct: 87 ttcttgcaagttgtgcagttgttgtctcaagctt 120
>42083_osa-MIR444b:mirbase
Length = 138
Score = 87.7 bits (44), Expect = 1e-18
Identities = 81/94 (86%), Gaps = 6/94 (6%)
Strand = Plus / Plus
Query: 9 ggcagcaactgcatatcttgcaagaaaatt------ggttttcgaaccataccgataatt 62
||||||||||||| ||||||||||||||| | ||||| ||||||||||| |||
Sbjct: 27 ggcagcaactgcacatcttgcaagaaaatctttagggtttttcagaccataccgatgatt 86
Query: 63 ttcttgcangttgtgcagttgttgtctcaagctt 96
|||||||| |||||||||||||||||||||||||
Sbjct: 87 ttcttgcaagttgtgcagttgttgtctcaagctt 120
>42478_ssp-MIR444a:mirbase
Length = 105
Score = 58.0 bits (29), Expect = 1e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 61 ttttcttgcangttgtgcagttgttgtctcaagctt 96
|||||||||| ||||||||||||||| |||||||||
Sbjct: 69 ttttcttgcaagttgtgcagttgttgcctcaagctt 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 1 aagctagaggcagcaactgcatatcttgcaagaaaa 36
||||| |||||| |||||||| | ||||||||||||
Sbjct: 104 aagcttgaggcaacaactgcacaacttgcaagaaaa 69
>42479_ssp-MIR444b:mirbase
Length = 106
Score = 56.0 bits (28), Expect = 5e-09
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 62 tttcttgcangttgtgcagttgttgtctcaagctt 96
||||||||| ||||||||||||||| |||||||||
Sbjct: 71 tttcttgcaagttgtgcagttgttgcctcaagctt 105
>42091_osa-MIR444f:mirbase
Length = 154
Score = 56.0 bits (28), Expect = 5e-09
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 62 tttcttgcangttgtgcagttgttgtctcaagctt 96
||||||||| ||||||||||||||| |||||||||
Sbjct: 110 tttcttgcaagttgtgcagttgttgcctcaagctt 144
>41894_hvu-MIR444b:mirbase
Length = 121
Score = 56.0 bits (28), Expect = 5e-09
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 62 tttcttgcangttgtgcagttgttgtctcaagctt 96
||||||||| |||||||||||| ||||||||||||
Sbjct: 78 tttcttgcaagttgtgcagttgctgtctcaagctt 112
>42082_osa-MIR444a:mirbase
Length = 131
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 1 aagctagaggcagcaactgcatatcttgcaagaa 34
||||| ||||||||||||||||| ||||||||||
Sbjct: 114 aagcttgaggcagcaactgcataacttgcaagaa 81
>42081_osa-MIR444a:mirbase
Length = 131
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 1 aagctagaggcagcaactgcatatcttgcaagaa 34
||||| ||||||||||||||||| ||||||||||
Sbjct: 114 aagcttgaggcagcaactgcataacttgcaagaa 81
>42089_osa-MIR444d:mirbase
Length = 143
Score = 48.1 bits (24), Expect = 1e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 62 tttcttgcangttgtgcagttgttgtctcaagctt 96
||||||||| |||||||||||| || |||||||||
Sbjct: 89 tttcttgcaagttgtgcagttgctgcctcaagctt 123
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1 aagctagaggcagcaactgcatatcttgcaagaaa 35
||||| ||||||||||||||| | |||||||||||
Sbjct: 123 aagcttgaggcagcaactgcacaacttgcaagaaa 89
>42088_osa-MIR444d:mirbase
Length = 143
Score = 48.1 bits (24), Expect = 1e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 62 tttcttgcangttgtgcagttgttgtctcaagctt 96
||||||||| |||||||||||| || |||||||||
Sbjct: 89 tttcttgcaagttgtgcagttgctgcctcaagctt 123
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1 aagctagaggcagcaactgcatatcttgcaagaaa 35
||||| ||||||||||||||| | |||||||||||
Sbjct: 123 aagcttgaggcagcaactgcacaacttgcaagaaa 89
>42087_osa-MIR444d:mirbase
Length = 143
Score = 48.1 bits (24), Expect = 1e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 62 tttcttgcangttgtgcagttgttgtctcaagctt 96
||||||||| |||||||||||| || |||||||||
Sbjct: 89 tttcttgcaagttgtgcagttgctgcctcaagctt 123
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1 aagctagaggcagcaactgcatatcttgcaagaaa 35
||||| ||||||||||||||| | |||||||||||
Sbjct: 123 aagcttgaggcagcaactgcacaacttgcaagaaa 89
>42648_tae-MIR444:mirbase
Length = 426
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1 aagctagaggcagcaactgcatatcttgcaagaaa 35
||||| |||||||||||||||| |||||||||||
Sbjct: 168 aagcttgaggcagcaactgcatgacttgcaagaaa 134
>42090_osa-MIR444e:mirbase
Length = 140
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 aagctagaggcagcaactgcatatcttgcaagaaa 35
|||||||||||| |||||||||| ||||| |||||
Sbjct: 22 aagctagaggcaccaactgcataacttgcgagaaa 56
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 aagctagaggcagcaactgcatatcttgc 29
||||| ||||||||||||||||| |||||
Sbjct: 119 aagcttgaggcagcaactgcataacttgc 91
