miRNEST 2.0, an integrative microRNA resource :: BLAST
>40338_rco-MIR159:mirbase
Length = 180
Score = 341 bits (172), Expect = 1e-94
Identities = 172/172 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 63
Query: 61 atcccacagccctataagcagagattataattttggataggcttgtggcttgcatatctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 atcccacagccctataagcagagattataattttggataggcttgtggcttgcatatctc 123
Query: 121 aggagcttcattaccttgtattagatccttgtttggattgaagggagctcta 172
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 aggagcttcattaccttgtattagatccttgtttggattgaagggagctcta 175
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 127 bits (64), Expect = 3e-30
Identities = 148/173 (85%), Gaps = 6/173 (3%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 60
|||||||||||||||||||||||| | || || ||||||||| ||||||||||||||||
Sbjct: 11 tggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatga 70
Query: 61 atcccacagccctataagca-gagattataattttggataggcttgtggcttgcatatct 119
||||||||||||||| | || || | ||||| ||| ||| || |||||||||||||
Sbjct: 71 atcccacagccctatcaccatcag----tcatttt-gatgggcctgcggcttgcatatct 125
Query: 120 caggagcttcattaccttgtattagatccttgtttggattgaagggagctcta 172
||||||||| ||||||| | ||||||| || |||||||||||||||||||||
Sbjct: 126 caggagctttattacctaatgttagatctttttttggattgaagggagctcta 178
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 121 bits (61), Expect = 2e-28
Identities = 147/173 (84%), Gaps = 2/173 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 60
|||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||
Sbjct: 9 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 68
Query: 61 atcccacagccctataagcagagattataattttggataggcttgtggcttgcatatctc 120
||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 69 atcccacagccctatcccgtcaatggggggcattggataggcttgtggcttgcatatctc 128
Query: 121 aggagcttcatta-ccttgtattagatccttgtttggattgaagggagctcta 172
||||||| ||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 129 aggagctgcattatccaagt-ttagatccttgtttggattgaagggagctcta 180
>40397_ahy-MIR159:mirbase
Length = 197
Score = 105 bits (53), Expect = 1e-23
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 60
|||||||||||||||||||| ||||| ||||| |||||||||||||||||| ||||||||
Sbjct: 3 tggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatgg 62
Query: 61 atcccacag 69
|||||||||
Sbjct: 63 atcccacag 71
Score = 54.0 bits (27), Expect = 4e-08
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 122 ggagcttcattaccttgtattagatccttgtttggattgaagggagctcta 172
|||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 127 ggagcttcattacctttccacagatccttatttggattgaagggagctcta 177
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 97.6 bits (49), Expect = 3e-21
Identities = 143/172 (83%), Gaps = 8/172 (4%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 60
|||||||||||||||||||||||||| ||||| |||||||||| ||||||| ||||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 61 atcccacagccctataagcagagattataattttggataggcttgtggcttgcatatctc 120
|| |||||| ||||| || | | | ||||||| ||| ||||||||||||||
Sbjct: 71 at-ccacagtcctat------ctatca-actgaaggataggtttgcggcttgcatatctc 122
Query: 121 aggagcttcattaccttgtattagatccttgtttggattgaagggagctcta 172
|||||||| ||| ||| | |||||||| | |||||||||||||||||||||
Sbjct: 123 aggagctttattgcctaatgttagatccctttttggattgaagggagctcta 174
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 97.6 bits (49), Expect = 3e-21
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 60
||||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 atcccacag 69
|||||||||
Sbjct: 62 atcccacag 70
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 97.6 bits (49), Expect = 3e-21
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 60
||||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 atcccacag 69
|||||||||
Sbjct: 62 atcccacag 70
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 95.6 bits (48), Expect = 1e-20
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 60
|||||||||||||||||||||||||| ||||| |||||||||| ||||||| ||||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 61 atcc 64
||||
Sbjct: 71 atcc 74
>40432_gma-MIR159a:mirbase
Length = 214
Score = 89.7 bits (45), Expect = 6e-19
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 60
||||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||||||
Sbjct: 21 tggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgg 80
Query: 61 atcccacag 69
|||||||||
Sbjct: 81 atcccacag 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 147 ccttgtttggattgaagggagctcta 172
|||| |||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctcta 195
>41218_csi-MIR159:mirbase
Length = 216
Score = 87.7 bits (44), Expect = 3e-18
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttg-atgggtagattgagctgctgagctatg 59
|||||||||||||||||||| ||||| ||| | | ||||| |||||||||||||||||||
Sbjct: 12 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 71
Query: 60 gatcccacagccctat 75
|||||||||| |||||
Sbjct: 72 gatcccacagtcctat 87
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 96 gataggcttgtggcttgcatatctcaggagcttcattacc 135
|||||||||||||||||||||| || ||| ||||||||||
Sbjct: 125 gataggcttgtggcttgcatatttctggaccttcattacc 164
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctcta 172
|||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctcta 206
>40435_gma-MIR159d:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 41 attgagctgctgagctatggatcccacag 69
||||||||||| |||||||||||||||||
Sbjct: 7 attgagctgcttagctatggatcccacag 35
>41528_sly-MIR159:mirbase
Length = 177
Score = 46.1 bits (23), Expect = 9e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 41 attgagctgctgagctatggatcccacagccctat 75
||||||||||||| |||||||| || |||||||||
Sbjct: 41 attgagctgctgacctatggattcctcagccctat 75
Score = 44.1 bits (22), Expect = 3e-05
Identities = 55/65 (84%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 110 ttgcatatctcaggagcttcatt--accttgtattagatccttgtttggattgaagggag 167
|||||||| |||||||||| ||| ||| | | || |||| || ||||||||||||||||
Sbjct: 113 ttgcatatgtcaggagctttattttaccctttgtttgatcattttttggattgaagggag 172
Query: 168 ctcta 172
|||||
Sbjct: 173 ctcta 177
>39804_aly-MIR159a:mirbase
Length = 222
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 106 tggcttgcatatctcaggagctt 128
|||||||||||||||||||||||
Sbjct: 130 tggcttgcatatctcaggagctt 152
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctcta 172
|||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctcta 203
>42700_zma-MIR159k:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 tgtttggattgaagggagctct 171
||||||||||||||||||||||
Sbjct: 177 tgtttggattgaagggagctct 198
>42699_zma-MIR159j:mirbase
Length = 252
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 tgtttggattgaagggagctct 171
||||||||||||||||||||||
Sbjct: 229 tgtttggattgaagggagctct 250
>42691_zma-MIR159b:mirbase
Length = 221
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 tgtttggattgaagggagctct 171
||||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctct 201
>42634_tae-MIR159a:mirbase
Length = 177
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 tgtttggattgaagggagctct 171
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 tgtttggattgaagggagctct 171
||||||||||||||||||||||
Sbjct: 9 tgtttggattgaagggagctct 30
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 tgtttggattgaagggagctct 171
||||||||||||||||||||||
Sbjct: 154 tgtttggattgaagggagctct 175
