miRNEST 2.0, an integrative microRNA resource :: BLAST
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 363 bits (183), Expect = e-101
Identities = 183/183 (100%)
Strand = Plus / Plus
Query: 1 ggagcttccctcagcccattcatggatacaaaagattgggttgcaaaattaaccactaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ggagcttccctcagcccattcatggatacaaaagattgggttgcaaaattaaccactaac 305
Query: 61 tcattcacacaatagtattcagttagggtgatgctctttttgctataatatgattgtgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tcattcacacaatagtattcagttagggtgatgctctttttgctataatatgattgtgtg 365
Query: 121 aatgaagtgatgcatacatattgtgtgaccctctttctctgagcttggactgaagggagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aatgaagtgatgcatacatattgtgtgaccctctttctctgagcttggactgaagggagc 425
Query: 181 tcc 183
|||
Sbjct: 426 tcc 428
>40466_gma-MIR319c:mirbase
Length = 221
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 148 accctctttctctgagcttggactgaagggagctcc 183
|||||||||||||| |||||||||||| ||||||||
Sbjct: 166 accctctttctctgtgcttggactgaaaggagctcc 201
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 ggagcttccctcagcccattcatgga 26
||||||||||||||||||||||||||
Sbjct: 22 ggagcttccctcagcccattcatgga 47
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 61 tcattcacacaatagtattcagttagggt 89
||||||| ||||||||||||| |||||||
Sbjct: 93 tcattcatacaatagtattcaattagggt 121
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 149 ccctctttctctgagcttggactgaagggagctcc 183
|||||||| |||| |||||||||||||||||||||
Sbjct: 158 ccctctttttctgtgcttggactgaagggagctcc 192
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 155 ttctctgagcttggactgaagggagctcc 183
||||||| |||||||||||||||||||||
Sbjct: 155 ttctctgtgcttggactgaagggagctcc 183
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 155 ttctctgagcttggactgaagggagctcc 183
||||||| |||||||||||||||||||||
Sbjct: 158 ttctctgtgcttggactgaagggagctcc 186
>40369_rco-MIR319c:mirbase
Length = 188
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 155 ttctctgagcttggactgaagggagctcc 183
||||||| |||||||||||||||||||||
Sbjct: 153 ttctctgtgcttggactgaagggagctcc 181
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 158 tctgagcttggactgaagggagctcc 183
|||| |||||||||||||||||||||
Sbjct: 155 tctgtgcttggactgaagggagctcc 180
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 158 tctgagcttggactgaagggagctcc 183
|||| |||||||||||||||||||||
Sbjct: 169 tctgtgcttggactgaagggagctcc 194
>42642_tae-MIR319:mirbase
Length = 211
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 163 gcttggactgaagggagctcc 183
|||||||||||||||||||||
Sbjct: 182 gcttggactgaagggagctcc 202
>41770_bdi-MIR319:mirbase
Length = 280
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 163 gcttggactgaagggagctcc 183
|||||||||||||||||||||
Sbjct: 224 gcttggactgaagggagctcc 244
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 163 gcttggactgaagggagctcc 183
|||||||||||||||||||||
Sbjct: 149 gcttggactgaagggagctcc 169
>41282_ctr-MIR319:mirbase
Length = 186
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 163 gcttggactgaagggagctcc 183
|||||||||||||||||||||
Sbjct: 155 gcttggactgaagggagctcc 175
>40703_mtr-MIR319:mirbase
Length = 207
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 163 gcttggactgaagggagctcc 183
|||||||||||||||||||||
Sbjct: 167 gcttggactgaagggagctcc 187
>40070_ath-MIR319b:mirbase
Length = 172
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 163 gcttggactgaagggagctcc 183
|||||||||||||||||||||
Sbjct: 150 gcttggactgaagggagctcc 170
>39859_aly-MIR319b:mirbase
Length = 246
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 163 gcttggactgaagggagctcc 183
|||||||||||||||||||||
Sbjct: 189 gcttggactgaagggagctcc 209
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 cttggactgaagggagctcc 183
||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctcc 181
>41544_sly-MIR319:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 cttggactgaagggagctcc 183
||||||||||||||||||||
Sbjct: 149 cttggactgaagggagctcc 168
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 cttggactgaagggagctcc 183
||||||||||||||||||||
Sbjct: 159 cttggactgaagggagctcc 178
>41185_aqc-MIR319:mirbase
Length = 177
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 cttggactgaagggagctcc 183
||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctcc 173
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 cttggactgaagggagctcc 183
||||||||||||||||||||
Sbjct: 155 cttggactgaagggagctcc 174
>40465_gma-MIR319b:mirbase
Length = 208
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 cttggactgaagggagctcc 183
||||||||||||||||||||
Sbjct: 169 cttggactgaagggagctcc 188
>40464_gma-MIR319a:mirbase
Length = 207
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 cttggactgaagggagctcc 183
||||||||||||||||||||
Sbjct: 168 cttggactgaagggagctcc 187
>40368_rco-MIR319b:mirbase
Length = 179
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 cttggactgaagggagctcc 183
||||||||||||||||||||
Sbjct: 153 cttggactgaagggagctcc 172
>40367_rco-MIR319a:mirbase
Length = 211
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 cttggactgaagggagctcc 183
||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctcc 204
>40071_ath-MIR319c:mirbase
Length = 199
Score = 40.1 bits (20), Expect = 6e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 152 tctttctctgagcttggactgaagggagctcc 183
||||| |||| | |||||||||||||||||||
Sbjct: 157 tctttatctgtgtttggactgaagggagctcc 188
>39861_aly-MIR319d:mirbase
Length = 267
Score = 40.1 bits (20), Expect = 6e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 152 tctttctctgagcttggactgaagggagctcc 183
||||| |||| | |||||||||||||||||||
Sbjct: 191 tctttatctgtgtttggactgaagggagctcc 222
>39860_aly-MIR319c:mirbase
Length = 271
Score = 40.1 bits (20), Expect = 6e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 152 tctttctctgagcttggactgaagggagctcc 183
||||| |||| | |||||||||||||||||||
Sbjct: 191 tctttatctgtgtttggactgaagggagctcc 222
>39740_smo-MIR319:mirbase
Length = 215
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 cttggactgaagggagctcc 183
||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctcc 204
>39484_ppt-MIR319e:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 cttggactgaagggagctcc 183
||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctcc 166
>39483_ppt-MIR319d:mirbase
Length = 170
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 cttggactgaagggagctcc 183
||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctcc 164
>39482_ppt-MIR319c:mirbase
Length = 189
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 cttggactgaagggagctcc 183
||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctcc 173
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 cttggactgaagggagctcc 183
||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcc 159
>39480_ppt-MIR319a:mirbase
Length = 169
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 cttggactgaagggagctcc 183
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
