miRNEST 2.0, an integrative microRNA resource :: BLAST
>41925_osa-MIR160c:mirbase
Length = 99
Score = 190 bits (96), Expect = 2e-49
Identities = 98/99 (98%)
Strand = Plus / Plus
Query: 26 ggaatgtgcctggctccctgtatgccactcatctagagcaacaaacttctgcgagaggtt 85
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaatgtgcctggctccctgtatgccactcatctagagcaacaaacttctgcgagaggtt 60
Query: 86 gcctatgatggatggngtgcacggagccaagcatattcc 124
||||||||||||||| |||||||||||||||||||||||
Sbjct: 61 gcctatgatggatggcgtgcacggagccaagcatattcc 99
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 93.7 bits (47), Expect = 3e-20
Identities = 83/94 (88%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 29 atgtgcctggctccctgtatgccactcatctagagcaaca-aacttctgcgagaggttgc 87
|||||||||||||||||||||||||||||||| ||||||| |||| ||||||||
Sbjct: 28 atgtgcctggctccctgtatgccactcatctatagcaacattccttcctgatgaggttgc 87
Query: 88 ctatgatggatggngtgcacggagccaagcatat 121
||| ||||||||| ||||||||||||||||||||
Sbjct: 88 ctaggatggatggcgtgcacggagccaagcatat 121
>42677_ttu-MIR160:mirbase
Length = 100
Score = 85.7 bits (43), Expect = 8e-18
Identities = 83/94 (88%), Gaps = 2/94 (2%)
Strand = Plus / Plus
Query: 29 atgtgcctggctccctgtatgccactcatctagagcaacaaacttctgcga-gaggttgc 87
|||||||||||||||||||||||||||||| |||||||| | ||| ||| | |||||||
Sbjct: 6 atgtgcctggctccctgtatgccactcatccagagcaac-accttttgcaataaggttgc 64
Query: 88 ctatgatggatggngtgcacggagccaagcatat 121
|| ||||||||| ||||||||| ||||||||||
Sbjct: 65 ctgcgatggatggcgtgcacggatccaagcatat 98
>42703_zma-MIR160c:mirbase
Length = 100
Score = 77.8 bits (39), Expect = 2e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 29 atgtgcctggctccctgtatgccactcatctagagcaac 67
|||||||||||||||||||||||||||||||||||||||
Sbjct: 4 atgtgcctggctccctgtatgccactcatctagagcaac 42
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 69.9 bits (35), Expect = 5e-13
Identities = 74/87 (85%), Gaps = 4/87 (4%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgccactcatctagagcaacaaacttctgcgagaggttgcctat 91
||||||||||||||||||||||||||||||| |||||| || | ||||||||||
Sbjct: 1 tgcctggctccctgtatgccactcatctagatcaacaa----ctacctatggttgcctat 56
Query: 92 gatggatggngtgcacggagccaagca 118
||||| ||| |||||||| ||||||||
Sbjct: 57 gatggttggcgtgcacggtgccaagca 83
>42705_zma-MIR160e:mirbase
Length = 94
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 25 gggaatgtgcctggctccctgtatgccactc 55
|||||| ||||||||||||||||||||||||
Sbjct: 2 gggaatatgcctggctccctgtatgccactc 32
>41924_osa-MIR160b:mirbase
Length = 139
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 31 gtgcctggctccctgtatgccactcat 57
|||||||||||||||||||||||||||
Sbjct: 29 gtgcctggctccctgtatgccactcat 55
>41923_osa-MIR160a:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 30 tgtgcctggctccctgtatgccactcatctagagcaac 67
|||||||||||||||||||||||| ||| |||| ||||
Sbjct: 2 tgtgcctggctccctgtatgccacacatgtagaccaac 39
>42704_zma-MIR160d:mirbase
Length = 142
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgccactc 55
||||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccactc 44
>42702_zma-MIR160b:mirbase
Length = 121
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 tgtgcctggctccctgtatgccac 53
||||||||||||||||||||||||
Sbjct: 19 tgtgcctggctccctgtatgccac 42
>42636_tae-MIR160:mirbase
Length = 148
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgccactc 55
||||||||||||||||||||||||
Sbjct: 22 tgcctggctccctgtatgccactc 45
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgccactc 55
||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgccactc 55
||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>41926_osa-MIR160d:mirbase
Length = 142
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgccactc 55
||||||||||||||||||||||||
Sbjct: 8 tgcctggctccctgtatgccactc 31
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 tgtgcctggctccctgtatgccac 53
||||||||||||||||||||||||
Sbjct: 29 tgtgcctggctccctgtatgccac 52
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgccactc 55
||||||||||||||||||||||||
Sbjct: 32 tgcctggctccctgtatgccactc 55
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 tgtgcctggctccctgtatgccac 53
||||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgccac 32
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 29 atgtgcctggctccctgtatgcca 52
||||||||||||||||||||||||
Sbjct: 8 atgtgcctggctccctgtatgcca 31
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 29 atgtgcctggctccctgtatgcca 52
||||||||||||||||||||||||
Sbjct: 8 atgtgcctggctccctgtatgcca 31
>41219_csi-MIR160:mirbase
Length = 143
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 29 atgtgcctggctccctgtatgcca 52
||||||||||||||||||||||||
Sbjct: 30 atgtgcctggctccctgtatgcca 53
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 29 atgtgcctggctccctgtatgcca 52
||||||||||||||||||||||||
Sbjct: 3 atgtgcctggctccctgtatgcca 26
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 29 atgtgcctggctccctgtatgcca 52
||||||||||||||||||||||||
Sbjct: 3 atgtgcctggctccctgtatgcca 26
>40436_gma-MIR160:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 29 atgtgcctggctccctgtatgcca 52
||||||||||||||||||||||||
Sbjct: 18 atgtgcctggctccctgtatgcca 41
>39374_pab-MIR160a:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 tgtgcctggctccctgtatgccac 53
||||||||||||||||||||||||
Sbjct: 12 tgtgcctggctccctgtatgccac 35
>42706_zma-MIR160f:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 gggaatgtgcctggctccctgtatgcc 51
|||||| ||||||||||||||||||||
Sbjct: 14 gggaatatgcctggctccctgtatgcc 40
>42701_zma-MIR160a:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcctggctccctgtatgccac 53
|||||||||||||||||||||||
Sbjct: 9 gtgcctggctccctgtatgccac 31
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcctggctccctgtatgccac 53
|||||||||||||||||||||||
Sbjct: 30 gtgcctggctccctgtatgccac 52
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 tgtgcctggctccctgtatgcca 52
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>40339_rco-MIR160a:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 tgtgcctggctccctgtatgcca 52
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>40020_ath-MIR160b:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcctggctccctgtatgccac 53
|||||||||||||||||||||||
Sbjct: 4 gtgcctggctccctgtatgccac 26
>39808_aly-MIR160b:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcctggctccctgtatgccac 53
|||||||||||||||||||||||
Sbjct: 20 gtgcctggctccctgtatgccac 42
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgccact 54
|||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccact 52
>42707_zma-MIR160g:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgccac 53
||||||||||||||||||||||
Sbjct: 2 tgcctggctccctgtatgccac 23
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgccac 53
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgccac 53
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>41869_far-MIR160:mirbase
Length = 148
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgccac 53
||||||||||||||||||||||
Sbjct: 53 tgcctggctccctgtatgccac 74
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgccac 53
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgccac 53
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>40658_mtr-MIR160:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 gtgcctggctccctgtatgcca 52
||||||||||||||||||||||
Sbjct: 20 gtgcctggctccctgtatgcca 41
>40340_rco-MIR160b:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgccac 53
||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccac 27
>40021_ath-MIR160c:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgccac 53
||||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgccac 26
>39809_aly-MIR160c:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgccac 53
||||||||||||||||||||||
Sbjct: 24 tgcctggctccctgtatgccac 45
>39732_smo-MIR160b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgccac 53
||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgccac 53
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgccac 53
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgcca 52
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgcca 52
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41529_sly-MIR160a:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgcca 52
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgcca 52
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgcca 52
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>40312_bra-MIR160a:mirbase
Length = 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgcca 52
|||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgcca 46
>40019_ath-MIR160a:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgcca 52
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>39807_aly-MIR160a:mirbase
Length = 158
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgcca 52
|||||||||||||||||||||
Sbjct: 42 tgcctggctccctgtatgcca 62
>39731_smo-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgcca 52
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>39463_ppt-MIR160i:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 gcctggctccctgtatgccac 53
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>39375_pab-MIR160b:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgcctggctccctgtatgcca 52
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
