miRNEST 2.0, an integrative microRNA resource :: BLAST
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 3 ggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacgaaaaacatga 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 ggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacgaaaaacatga 72
Query: 63 accgatcgataaacctctgcatcca 87
|||||||||||||||||||||||||
Sbjct: 73 accgatcgataaacctctgcatcca 97
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 97.6 bits (49), Expect = 1e-21
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 3 ggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacgaaaaacatga 62
|||||||||||||||||||||| |||||| | |||||||||| |||||| |||| ||
Sbjct: 13 ggaggcagcggttcatcgatcttttcctgaagatttttttgttttacacgaacaacacga 72
Query: 63 accgatcgataaacctctgcatcca 87
|||||||||||||||||||||||||
Sbjct: 73 accgatcgataaacctctgcatcca 97
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 97.6 bits (49), Expect = 1e-21
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 3 ggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacgaaaaacatga 62
|||||||||||||||||||||| |||||| | |||||||||| |||||| |||| ||
Sbjct: 13 ggaggcagcggttcatcgatcttttcctgaagatttttttgttttacacgaacaacacga 72
Query: 63 accgatcgataaacctctgcatcca 87
|||||||||||||||||||||||||
Sbjct: 73 accgatcgataaacctctgcatcca 97
>41090_tcc-MIR162:mirbase
Length = 131
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 3 ggaggcagcggttcatcgatctcttcctgg 32
||||||||||||||||||||||||||||||
Sbjct: 23 ggaggcagcggttcatcgatctcttcctgg 52
>40342_rco-MIR162:mirbase
Length = 101
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 3 ggaggcagcggttcatcgatctcttcctgg 32
||||||||||||||||||||||||||||||
Sbjct: 6 ggaggcagcggttcatcgatctcttcctgg 35
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 58 catgaaccgatcgataaacctctgcatcca 87
|||||| |||||||||||||||||||||||
Sbjct: 66 catgaatcgatcgataaacctctgcatcca 95
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 3 ggaggcagcggttcatcgatctcttcctgg 32
||||||||||||||||||||||||||||||
Sbjct: 15 ggaggcagcggttcatcgatctcttcctgg 44
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 56 aacatgaaccgatcgataaacctctgcatcca 87
|||||||| |||||||||||||||||||||||
Sbjct: 68 aacatgaatcgatcgataaacctctgcatcca 99
>39812_aly-MIR162a:mirbase
Length = 228
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 3 ggaggcagcggttcatcgatctcttcctgg 32
||||||||||||||||||||||||||||||
Sbjct: 70 ggaggcagcggttcatcgatctcttcctgg 99
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 53 aaaaacatgaaccgatcgataaacctctgcatcca 87
|||| |||||| ||||||||||||||||||||||
Sbjct: 121 aaaagcatgaatagatcgataaacctctgcatcca 155
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 3 ggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||||||||
Sbjct: 26 ggaggcagcggttcatcgatctcttcctg 54
>40024_ath-MIR162a:mirbase
Length = 140
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 3 ggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||||||||
Sbjct: 27 ggaggcagcggttcatcgatctcttcctg 55
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 53 aaaaacatgaaccgatcgataaacctctgcatcca 87
|||| |||||| ||||||||||||||||||||||
Sbjct: 74 aaaagcatgaatagatcgataaacctctgcatcca 108
>40437_gma-MIR162:mirbase
Length = 102
Score = 56.0 bits (28), Expect = 4e-09
Identities = 68/81 (83%), Gaps = 4/81 (4%)
Strand = Plus / Plus
Query: 7 gcagcggttcatcgatctcttcctggccaattttttgtttagcacgaaaaacatgaaccg 66
||||||||||||||||||||||||| | | ||||||| || | || |||||| ||
Sbjct: 16 gcagcggttcatcgatctcttcctg----aatcgttgtttaacatcagaaccatgaatcg 71
Query: 67 atcgataaacctctgcatcca 87
|||||||||||||||||||||
Sbjct: 72 atcgataaacctctgcatcca 92
>41220_csi-MIR162:mirbase
Length = 201
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 57 acatgaaccgatcgataaacctctgcatcca 87
||||||| |||||||||||||||||||||||
Sbjct: 150 acatgaatcgatcgataaacctctgcatcca 180
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 ggaggcagcggttcatcgatc 23
|||||||||||||||||||||
Sbjct: 91 ggaggcagcggttcatcgatc 111
>39813_aly-MIR162b:mirbase
Length = 184
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 53 aaaaacatgaaccgatcgataaacctctgcatcca 87
|||| |||||| |||||||||||||||||||||||
Sbjct: 98 aaaagcatgaatcgatcgataaacctctgcatcca 132
>41578_vvi-MIR162:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||||
Sbjct: 15 gcagcggttcatcgatctcttcctg 39
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 tcgataaacctctgcatcca 87
||||||||||||||||||||
Sbjct: 73 tcgataaacctctgcatcca 92
>40663_mtr-MIR162:mirbase
Length = 124
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 55 aaacatgaaccgatcgataaacctctgcatcca 87
||||||||| || ||||||||||||||||||||
Sbjct: 74 aaacatgaatcggtcgataaacctctgcatcca 106
>42502_sbi-MIR162:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 cgatcgataaacctctgcatcca 87
|||||||||||||||||||||||
Sbjct: 104 cgatcgataaacctctgcatcca 126
>41929_osa-MIR162a:mirbase
Length = 171
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 cgatcgataaacctctgcatcca 87
|||||||||||||||||||||||
Sbjct: 140 cgatcgataaacctctgcatcca 162
>40025_ath-MIR162b:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 cgatcgataaacctctgcatcca 87
|||||||||||||||||||||||
Sbjct: 76 cgatcgataaacctctgcatcca 98
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 ggaggcagcggttcatcgatc 23
|||||||||||||||||||||
Sbjct: 14 ggaggcagcggttcatcgatc 34
>41736_bdi-MIR162:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 cgatcgataaacctctgcatcc 86
||||||||||||||||||||||
Sbjct: 108 cgatcgataaacctctgcatcc 129
>42708_zma-MIR162:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 tcgataaacctctgcatcca 87
||||||||||||||||||||
Sbjct: 110 tcgataaacctctgcatcca 129
>41530_sly-MIR162:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 tcgataaacctctgcatcca 87
||||||||||||||||||||
Sbjct: 79 tcgataaacctctgcatcca 98
>41930_osa-MIR162b:mirbase
Length = 134
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 65 cgatcgataaacctctgcatcca 87
|||||||||| ||||||||||||
Sbjct: 101 cgatcgataagcctctgcatcca 123
