miRNEST 2.0, an integrative microRNA resource :: BLAST
>40009_ath-MIR156h:mirbase
Length = 106
Score = 115 bits (58), Expect = 5e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaagccgggattagcaaatataaagttttgcccttgtcgg 60
||||||||||||||||||||||| | |||||||||||| | | |||||||||||||||||
Sbjct: 11 ttgacagaagaaagagagcacaacctgggattagcaaaaagatagttttgcccttgtcgg 70
Query: 61 gagtgtgctctctttacttctg 82
||||||||||||||| ||||||
Sbjct: 71 gagtgtgctctctttccttctg 92
>39797_aly-MIR156h:mirbase
Length = 99
Score = 115 bits (58), Expect = 5e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaagccgggattagcaaatataaagttttgcccttgtcgg 60
||||||||||||||||||||||| | |||||||||||| | | |||||||||||||||||
Sbjct: 7 ttgacagaagaaagagagcacaacctgggattagcaaaaagatagttttgcccttgtcgg 66
Query: 61 gagtgtgctctctttacttctg 82
||||||||||||||| ||||||
Sbjct: 67 gagtgtgctctctttccttctg 88
>41080_tcc-MIR156a:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 72/86 (83%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaagccgggattagcaaatataaagt-tttgcccttgtcg 59
||||||||||| ||||||||||| |||| || ||| || | ||||| ||||| |||| |
Sbjct: 20 ttgacagaagagagagagcacaacccggcatcagctaa-agaaagtctttgcttttgttg 78
Query: 60 ggagtgtgctctctttacttctgtca 85
|||||||||| ||| | |||||||||
Sbjct: 79 ggagtgtgctttctcttcttctgtca 104
>40430_gma-MIR156f:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaagccggga 30
||||||||||| ||||||||||| ||||||
Sbjct: 11 ttgacagaagagagagagcacaacccggga 40
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 47 tttgcccttgtcgggagtgtgctctct 73
|||||| |||| |||||||||||||||
Sbjct: 56 tttgcctttgttgggagtgtgctctct 82
>40426_gma-MIR156b:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaagccggga 30
||||||||||| ||||||||||| ||||||
Sbjct: 20 ttgacagaagagagagagcacaacccggga 49
>40334_rco-MIR156e:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaagccgggattag 34
||||||||||| ||||||||||| |||| |||||
Sbjct: 5 ttgacagaagagagagagcacaacccggcattag 38
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 47 tttgcccttgtcgggagtgtgctctct 73
|||||| |||| |||||||||||||||
Sbjct: 50 tttgcctttgttgggagtgtgctctct 76
>39728_smo-MIR156c:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcaca 22
||||||||||||||||||||||
Sbjct: 11 ttgacagaagaaagagagcaca 32
>41914_osa-MIR156k:mirbase
Length = 106
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 2 tgacagaagaaagagagcacaagccgg 28
|||||||||| ||||||||||| ||||
Sbjct: 11 tgacagaagagagagagcacaacccgg 37
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaa 23
||||||||||| |||||||||||
Sbjct: 11 ttgacagaagatagagagcacaa 33
>41561_vvi-MIR156a:mirbase
Length = 104
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 59 gggagtgtgctctctttacttctgtca 85
||||||||||||||| | |||||||||
Sbjct: 66 gggagtgtgctctctcttcttctgtca 92
>41204_aqc-MIR529:mirbase
Length = 125
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaa 23
||||||||||| |||||||||||
Sbjct: 17 ttgacagaagagagagagcacaa 39
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaa 23
||||||||||| |||||||||||
Sbjct: 21 ttgacagaagatagagagcacaa 43
>40431_gma-MIR156g:mirbase
Length = 118
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1 ttgacagaagaaagagagcacaa 23
||||||||||| |||||||||||
Sbjct: 107 ttgacagaagatagagagcacaa 85
>40427_gma-MIR156c:mirbase
Length = 185
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaa 23
||||||||||| |||||||||||
Sbjct: 146 ttgacagaagatagagagcacaa 168
>40396_ahy-MIR156c:mirbase
Length = 139
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaa 23
||||||||||| |||||||||||
Sbjct: 21 ttgacagaagagagagagcacaa 43
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaa 23
||||||||||| |||||||||||
Sbjct: 23 ttgacagaagatagagagcacaa 45
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaa 23
||||||||||| |||||||||||
Sbjct: 23 ttgacagaagatagagagcacaa 45
>40393_ahy-MIR156a:mirbase
Length = 116
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaa 23
||||||||||| |||||||||||
Sbjct: 17 ttgacagaagagagagagcacaa 39
>40335_rco-MIR156f:mirbase
Length = 97
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaa 23
||||||||||| |||||||||||
Sbjct: 6 ttgacagaagatagagagcacaa 28
>39755_smo-MIR1088:mirbase
Length = 96
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 gacagaagaaagagagcac 21
|||||||||||||||||||
Sbjct: 15 gacagaagaaagagagcac 33
>39754_smo-MIR1088:mirbase
Length = 96
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 gacagaagaaagagagcac 21
|||||||||||||||||||
Sbjct: 15 gacagaagaaagagagcac 33
