miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42482_ssp-MIR827:mirbase
Length = 130
Score = 240 bits (121), Expect = 2e-64
Identities = 121/121 (100%)
Strand = Plus / Plus
Query: 1 gttttgttggtggtcatttaaccatgcttccatcgatgggtgcatggtttatggcagagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gttttgttggtggtcatttaaccatgcttccatcgatgggtgcatggtttatggcagagt 64
Query: 61 gtgatgccatgaactcatcatggtcatgcatgtgtgcatggttagatgaccatcagcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gtgatgccatgaactcatcatggtcatgcatgtgtgcatggttagatgaccatcagcaaa 124
Query: 121 c 121
|
Sbjct: 125 c 125
>42835_zma-MIR827:mirbase
Length = 122
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 94 gtgcatggttagatgaccatcagcaaac 121
||||||||||||||||||||||||||||
Sbjct: 93 gtgcatggttagatgaccatcagcaaac 120
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 gttttgttggtggtcatttaaccatgc 27
|||||||||||||||||||||||||||
Sbjct: 1 gttttgttggtggtcatttaaccatgc 27
>41808_bdi-MIR827:mirbase
Length = 164
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 98 atggttagatgaccatcagcaaac 121
||||||||||||||||||||||||
Sbjct: 109 atggttagatgaccatcagcaaac 132
>42188_osa-MIR827b:mirbase
Length = 138
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 99 tggttagatgaccatcagcaaac 121
|||||||||||||||||||||||
Sbjct: 105 tggttagatgaccatcagcaaac 127
>42187_osa-MIR827a:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 99 tggttagatgaccatcagcaaac 121
|||||||||||||||||||||||
Sbjct: 94 tggttagatgaccatcagcaaac 116
>41265_csi-MIR827:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 98 atggttagatgaccatcagcaaac 121
|||||||||||||||||| |||||
Sbjct: 57 atggttagatgaccatcaacaaac 80
