miRNEST 2.0, an integrative microRNA resource :: BLAST
>40090_ath-MIR398b:mirbase
Length = 116
Score = 77.8 bits (39), Expect = 1e-15
Identities = 82/95 (86%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 1 agggtcgatatgagaacacatgtgcaatcaacggctgtaatgacgccacatcattataac 60
||||| |||||||||||||| | | ||||||||||||||||||||| || ||||| | ||
Sbjct: 12 agggttgatatgagaacacacgagtaatcaacggctgtaatgacgctacgtcattgttac 71
Query: 61 acatctgtcttttcatgtgttctcaggtcacccct 95
| ||| ||||||||||||||||||||||||||
Sbjct: 72 agctct-cgttttcatgtgttctcaggtcacccct 105
>39882_aly-MIR398b:mirbase
Length = 142
Score = 77.8 bits (39), Expect = 1e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 1 agggtcgatatgagaacacatgtgcaatcaacggctgtaatgacgccacatcatt 55
||||| |||||||| ||||||||| |||||||||||||||||||||||| |||||
Sbjct: 30 agggttgatatgaggacacatgtgtaatcaacggctgtaatgacgccacgtcatt 84
>40091_ath-MIR398c:mirbase
Length = 115
Score = 71.9 bits (36), Expect = 8e-14
Identities = 81/95 (85%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 1 agggtcgatatgagaacacatgtgcaatcaacggctgtaatgacgccacatcattataac 60
||||| |||||||||||||| | ||||||||||||| ||| ||||| || ||||| |
Sbjct: 12 agggttgatatgagaacacacgagcaatcaacggctataacgacgctacgtcattgt--t 69
Query: 61 acatctgtcttttcatgtgttctcaggtcacccct 95
||| || || |||||||||||||||||||||||||
Sbjct: 70 acagctctcgtttcatgtgttctcaggtcacccct 104
>39883_aly-MIR398c:mirbase
Length = 132
Score = 60.0 bits (30), Expect = 3e-10
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 1 agggtcgatatgagaacacatgtgcaatcaacggctgt-aatgacgccacatcattat 57
|||||||| ||||||||| ||| ||||||||||||||| |||||||| || |||||||
Sbjct: 17 agggtcgacatgagaacatatgagcaatcaacggctgtaaatgacgctacgtcattat 74
>40382_rco-MIR398b:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 tttcatgtgttctcaggtcacccct 95
||||||||||||||||||| |||||
Sbjct: 96 tttcatgtgttctcaggtcgcccct 120
>42039_osa-MIR398a:mirbase
Length = 115
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 tgtgttctcaggtcacccct 95
||||||||||||||||||||
Sbjct: 85 tgtgttctcaggtcacccct 104
>41800_bdi-MIR398b:mirbase
Length = 163
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 tgtgttctcaggtcacccct 95
||||||||||||||||||||
Sbjct: 101 tgtgttctcaggtcacccct 120
>41665_vvi-MIR398a:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 tgtgttctcaggtcacccct 95
||||||||||||||||||||
Sbjct: 73 tgtgttctcaggtcacccct 92
>41446_ptc-MIR398b:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 ttcatgtgttctcaggtcacccct 95
|||||||||||||||||| |||||
Sbjct: 52 ttcatgtgttctcaggtcgcccct 75
>41445_ptc-MIR398a:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 tgtgttctcaggtcacccct 95
||||||||||||||||||||
Sbjct: 80 tgtgttctcaggtcacccct 99
>41245_csi-MIR398:mirbase
Length = 225
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 tgtgttctcaggtcacccct 95
||||||||||||||||||||
Sbjct: 132 tgtgttctcaggtcacccct 151
>41190_aqc-MIR398a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 tgtgttctcaggtcacccct 95
||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccct 85
>41145_tcc-MIR398b:mirbase
Length = 165
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 tgtgttctcaggtcacccct 95
||||||||||||||||||||
Sbjct: 125 tgtgttctcaggtcacccct 144
>41078_gra-MIR398:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 tgtgttctcaggtcacccct 95
||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccct 85
>41059_ghr-MIR398:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 tgtgttctcaggtcacccct 95
||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccct 85
>40728_mtr-MIR398a:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 tgtgttctcaggtcacccct 95
||||||||||||||||||||
Sbjct: 73 tgtgttctcaggtcacccct 92
>40479_gma-MIR398b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 tgtgttctcaggtcacccct 95
||||||||||||||||||||
Sbjct: 96 tgtgttctcaggtcacccct 115
>40478_gma-MIR398a:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 tgtgttctcaggtcacccct 95
||||||||||||||||||||
Sbjct: 77 tgtgttctcaggtcacccct 96
>40403_ahy-MIR398:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 tgtgttctcaggtcacccct 95
||||||||||||||||||||
Sbjct: 129 tgtgttctcaggtcacccct 148
>40381_rco-MIR398a:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 tgtgttctcaggtcacccct 95
||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccct 85
>40308_bol-MIR398a:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 tgtgttctcaggtcacccct 95
||||||||||||||||||||
Sbjct: 71 tgtgttctcaggtcacccct 90
>40089_ath-MIR398a:mirbase
Length = 105
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 tgtgttctcaggtcacccct 95
||||||||||||||||||||
Sbjct: 75 tgtgttctcaggtcacccct 94
>39881_aly-MIR398a:mirbase
Length = 182
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 tgtgttctcaggtcacccct 95
||||||||||||||||||||
Sbjct: 122 tgtgttctcaggtcacccct 141
