miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41630_vvi-MIR171i:mirbase
          Length = 103

 Score = 75.8 bits (38), Expect = 4e-15
 Identities = 71/81 (87%), Gaps = 2/81 (2%)
 Strand = Plus / Plus

                                                                      
Query: 6  gatgttggcgtggctcaatcaaatcaaacttctcaactgtttattgggtcctttaatttg 65
          ||||||||  ||||||||||||||||||  || |||  |||  |||||||||||||| ||
Sbjct: 13 gatgttggaatggctcaatcaaatcaaatctcccaagggtt--ttgggtcctttaatctg 70

                               
Query: 66 attgagccgtgccaatatcat 86
          |||||||||||||||||||||
Sbjct: 71 attgagccgtgccaatatcat 91




>41178_aqc-MIR171b:mirbase
          Length = 77

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                
Query: 48 attgggtcctttaatttgattgagccgtgccaatatca 85
          ||||||||||||||| ||||||||||||||||||||||
Sbjct: 39 attgggtcctttaatctgattgagccgtgccaatatca 76




>41121_tcc-MIR171f:mirbase
          Length = 117

 Score = 65.9 bits (33), Expect = 4e-12
 Identities = 71/81 (87%), Gaps = 2/81 (2%)
 Strand = Plus / Plus

                                                                      
Query: 6  gatgttggcgtggctcaatcaaatcaaacttctcaa-ctgtttattgggtcctttaattt 64
          ||||||||  ||||||||||||||||||  || ||| || ||||| ||||  ||||||||
Sbjct: 19 gatgttggaatggctcaatcaaatcaaatctcccaagctttttat-gggtgttttaattt 77

                               
Query: 65 gattgagccgtgccaatatca 85
          |||||||||||||||||||||
Sbjct: 78 gattgagccgtgccaatatca 98




>40363_rco-MIR171e:mirbase
          Length = 84

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                              
Query: 49 ttgggtcctttaatttgattgagccgtgccaatatc 84
          |||||||||||||| |||||||||||||||||||||
Sbjct: 44 ttgggtcctttaatctgattgagccgtgccaatatc 79




>41622_vvi-MIR171a:mirbase
          Length = 99

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                            
Query: 53 gtcctttaatttgattgagccgtgccaatatcat 86
          |||||||||| |||||||||||||||||||||||
Sbjct: 57 gtcctttaatctgattgagccgtgccaatatcat 90




>41388_ptc-MIR171h:mirbase
          Length = 100

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                               
Query: 49 ttgggtcctttaatttgattgagccgtgccaatatca 85
          ||||||| |||||| ||||||||||||||||||||||
Sbjct: 56 ttgggtcgtttaatctgattgagccgtgccaatatca 92




>41387_ptc-MIR171g:mirbase
          Length = 100

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                               
Query: 49 ttgggtcctttaatttgattgagccgtgccaatatca 85
          ||||||| |||||| ||||||||||||||||||||||
Sbjct: 56 ttgggtcttttaatctgattgagccgtgccaatatca 92




>41122_tcc-MIR171g:mirbase
          Length = 115

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                           
Query: 53 gtcctttaatttgattgagccgtgccaatatca 85
          |||||||| | ||||||||||||||||||||||
Sbjct: 64 gtcctttagtctgattgagccgtgccaatatca 96




>41119_tcc-MIR171d:mirbase
          Length = 117

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 61 atttgattgagccgtgccaatatca 85
          |||||||||||||||||||||||||
Sbjct: 74 atttgattgagccgtgccaatatca 98




>40700_mtr-MIR171f:mirbase
          Length = 95

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 61 atttgattgagccgtgccaatatca 85
          |||||||||||||||||||||||||
Sbjct: 64 atttgattgagccgtgccaatatca 88




>40457_gma-MIR171c:mirbase
          Length = 104

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 61 atttgattgagccgtgccaatatca 85
          |||||||||||||||||||||||||
Sbjct: 69 atttgattgagccgtgccaatatca 93




>40361_rco-MIR171c:mirbase
          Length = 87

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 56 ctttaatttgattgagccgtgccaatatc 84
          ||||||| |||||||||||||||||||||
Sbjct: 54 ctttaatctgattgagccgtgccaatatc 82




>40062_ath-MIR171c:mirbase
          Length = 116

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 61  atttgattgagccgtgccaatatca 85
           |||||||||||||||||||||||||
Sbjct: 84  atttgattgagccgtgccaatatca 108




>42762_zma-MIR171b:mirbase
          Length = 85

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 62 tttgattgagccgtgccaatatca 85
          ||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatca 83




>42556_sbi-MIR171k:mirbase
          Length = 87

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 62 tttgattgagccgtgccaatatca 85
          ||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatca 83




>42546_sbi-MIR171a:mirbase
          Length = 161

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 62  tttgattgagccgtgccaatatca 85
           ||||||||||||||||||||||||
Sbjct: 120 tttgattgagccgtgccaatatca 143




>41983_osa-MIR171c:mirbase
          Length = 99

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 62 tttgattgagccgtgccaatatca 85
          ||||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatatca 90




>41982_osa-MIR171b:mirbase
          Length = 100

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 62 tttgattgagccgtgccaatatca 85
          ||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatca 91




>41766_bdi-MIR171c:mirbase
          Length = 86

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 62 tttgattgagccgtgccaatatca 85
          ||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatca 85




>41625_vvi-MIR171d:mirbase
          Length = 100

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 62 tttgattgagccgtgccaatatca 85
          ||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatca 88




>41624_vvi-MIR171c:mirbase
          Length = 103

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 62 tttgattgagccgtgccaatatca 85
          ||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatca 91




>41389_ptc-MIR171i:mirbase
          Length = 129

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 61  atttgattgagccgtgccaatatc 84
           ||||||||||||||||||||||||
Sbjct: 97  atttgattgagccgtgccaatatc 120




>41385_ptc-MIR171e:mirbase
          Length = 94

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                              
Query: 49 ttgggtcctttaatttgattgagccgtgccaatatc 84
          |||||| |||| || |||||||||||||||||||||
Sbjct: 50 ttgggttctttcatctgattgagccgtgccaatatc 85




>41382_ptc-MIR171b:mirbase
          Length = 103

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 62 tttgattgagccgtgccaatatca 85
          ||||||||||||||||||||||||
Sbjct: 69 tttgattgagccgtgccaatatca 92




>41381_ptc-MIR171a:mirbase
          Length = 104

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 62 tttgattgagccgtgccaatatca 85
          ||||||||||||||||||||||||
Sbjct: 70 tttgattgagccgtgccaatatca 93




>41216_crt-MIR171:mirbase
          Length = 201

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 62  tttgattgagccgtgccaatatca 85
           ||||||||||||||||||||||||
Sbjct: 159 tttgattgagccgtgccaatatca 182




>40360_rco-MIR171b:mirbase
          Length = 91

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 62 tttgattgagccgtgccaatatca 85
          ||||||||||||||||||||||||
Sbjct: 61 tttgattgagccgtgccaatatca 84




>40359_rco-MIR171a:mirbase
          Length = 92

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 62 tttgattgagccgtgccaatatca 85
          ||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatca 85




>40318_bra-MIR171a:mirbase
          Length = 85

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 62 tttgattgagccgtgccaatatca 85
          ||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatca 83




>40305_bol-MIR171a:mirbase
          Length = 96

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 62 tttgattgagccgtgccaatatca 85
          ||||||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatatca 89




>40289_bna-MIR171e:mirbase
          Length = 92

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 62 tttgattgagccgtgccaatatca 85
          ||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatca 88




>40288_bna-MIR171d:mirbase
          Length = 96

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 62 tttgattgagccgtgccaatatca 85
          ||||||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatatca 89




>39851_aly-MIR171c:mirbase
          Length = 111

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 62 tttgattgagccgtgccaatatca 85
          ||||||||||||||||||||||||
Sbjct: 72 tttgattgagccgtgccaatatca 95




>42769_zma-MIR171i:mirbase
          Length = 104

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 63 ttgattgagccgtgccaatatca 85
          |||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatca 86




>42766_zma-MIR171f:mirbase
          Length = 155

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 63  ttgattgagccgtgccaatatca 85
           |||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatca 136




>41538_sly-MIR171a:mirbase
          Length = 122

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 62  tttgattgagccgtgccaatatc 84
           |||||||||||||||||||||||
Sbjct: 85  tttgattgagccgtgccaatatc 107




>41181_aqc-MIR171e:mirbase
          Length = 102

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 62 tttgattgagccgtgccaatatc 84
          |||||||||||||||||||||||
Sbjct: 23 tttgattgagccgtgccaatatc 1




>41180_aqc-MIR171d:mirbase
          Length = 106

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 62  tttgattgagccgtgccaatatc 84
           |||||||||||||||||||||||
Sbjct: 82  tttgattgagccgtgccaatatc 104




>41177_aqc-MIR171a:mirbase
          Length = 102

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 62  tttgattgagccgtgccaatatc 84
           |||||||||||||||||||||||
Sbjct: 78  tttgattgagccgtgccaatatc 100




>41120_tcc-MIR171e:mirbase
          Length = 161

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 62  tttgattgagccgtgccaatatc 84
           |||||||||||||||||||||||
Sbjct: 119 tttgattgagccgtgccaatatc 141




>40701_mtr-MIR171g:mirbase
          Length = 105

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 62  tttgattgagccgtgccaatatc 84
           |||||||||||||||||||||||
Sbjct: 78  tttgattgagccgtgccaatatc 100




>40698_mtr-MIR171d:mirbase
          Length = 105

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 62  tttgattgagccgtgccaatatc 84
           |||||||||||||||||||||||
Sbjct: 78  tttgattgagccgtgccaatatc 100




>40695_mtr-MIR171:mirbase
          Length = 114

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                             
Query: 4  ttgatgttggcgtggctcaatcaaatcaaacttct 38
          ||||||||||| || ||||||||||||||| ||||
Sbjct: 19 ttgatgttggcttgtctcaatcaaatcaaagttct 53



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 64 tgattgagccgtgccaatatcat 86
          |||||||| ||||||||||||||
Sbjct: 75 tgattgagtcgtgccaatatcat 97




>40364_rco-MIR171f:mirbase
          Length = 111

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 62  tttgattgagccgtgccaatatc 84
           |||||||||||||||||||||||
Sbjct: 84  tttgattgagccgtgccaatatc 106




>40362_rco-MIR171d:mirbase
          Length = 124

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 62  tttgattgagccgtgccaatatc 84
           |||||||||||||||||||||||
Sbjct: 97  tttgattgagccgtgccaatatc 119




>42770_zma-MIR171j:mirbase
          Length = 129

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 64  tgattgagccgtgccaatatca 85
           ||||||||||||||||||||||
Sbjct: 90  tgattgagccgtgccaatatca 111




>42547_sbi-MIR171b:mirbase
          Length = 132

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 64  tgattgagccgtgccaatatca 85
           ||||||||||||||||||||||
Sbjct: 93  tgattgagccgtgccaatatca 114




>41986_osa-MIR171f:mirbase
          Length = 127

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 64  tgattgagccgtgccaatatca 85
           ||||||||||||||||||||||
Sbjct: 97  tgattgagccgtgccaatatca 118




>40697_mtr-MIR171c:mirbase
          Length = 105

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 62 tttgattgagccgtgccaatat 83
          ||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatat 99




>42765_zma-MIR171e:mirbase
          Length = 126

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 64  tgattgagccgtgccaatatc 84
           |||||||||||||||||||||
Sbjct: 87  tgattgagccgtgccaatatc 107




>42764_zma-MIR171d:mirbase
          Length = 121

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 64  tgattgagccgtgccaatatc 84
           |||||||||||||||||||||
Sbjct: 82  tgattgagccgtgccaatatc 102




>42641_tae-MIR171b:mirbase
          Length = 138

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 65  gattgagccgtgccaatatca 85
           |||||||||||||||||||||
Sbjct: 90  gattgagccgtgccaatatca 110




>42640_tae-MIR171a:mirbase
          Length = 130

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 64  tgattgagccgtgccaatatc 84
           |||||||||||||||||||||
Sbjct: 89  tgattgagccgtgccaatatc 109




>42554_sbi-MIR171i:mirbase
          Length = 90

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 64 tgattgagccgtgccaatatc 84
          |||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88




>42549_sbi-MIR171d:mirbase
          Length = 153

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 64  tgattgagccgtgccaatatc 84
           |||||||||||||||||||||
Sbjct: 114 tgattgagccgtgccaatatc 134




>41985_osa-MIR171e:mirbase
          Length = 119

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 64  tgattgagccgtgccaatatc 84
           |||||||||||||||||||||
Sbjct: 89  tgattgagccgtgccaatatc 109




>41984_osa-MIR171d:mirbase
          Length = 135

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 64  tgattgagccgtgccaatatc 84
           |||||||||||||||||||||
Sbjct: 105 tgattgagccgtgccaatatc 125




>41890_hvu-MIR171:mirbase
          Length = 173

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 64  tgattgagccgtgccaatatc 84
           |||||||||||||||||||||
Sbjct: 112 tgattgagccgtgccaatatc 132