miRNEST 2.0, an integrative microRNA resource :: BLAST
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 75.8 bits (38), Expect = 4e-15
Identities = 71/81 (87%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 6 gatgttggcgtggctcaatcaaatcaaacttctcaactgtttattgggtcctttaatttg 65
|||||||| |||||||||||||||||| || ||| ||| |||||||||||||| ||
Sbjct: 13 gatgttggaatggctcaatcaaatcaaatctcccaagggtt--ttgggtcctttaatctg 70
Query: 66 attgagccgtgccaatatcat 86
|||||||||||||||||||||
Sbjct: 71 attgagccgtgccaatatcat 91
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 48 attgggtcctttaatttgattgagccgtgccaatatca 85
||||||||||||||| ||||||||||||||||||||||
Sbjct: 39 attgggtcctttaatctgattgagccgtgccaatatca 76
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 65.9 bits (33), Expect = 4e-12
Identities = 71/81 (87%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 6 gatgttggcgtggctcaatcaaatcaaacttctcaa-ctgtttattgggtcctttaattt 64
|||||||| |||||||||||||||||| || ||| || ||||| |||| ||||||||
Sbjct: 19 gatgttggaatggctcaatcaaatcaaatctcccaagctttttat-gggtgttttaattt 77
Query: 65 gattgagccgtgccaatatca 85
|||||||||||||||||||||
Sbjct: 78 gattgagccgtgccaatatca 98
>40363_rco-MIR171e:mirbase
Length = 84
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 49 ttgggtcctttaatttgattgagccgtgccaatatc 84
|||||||||||||| |||||||||||||||||||||
Sbjct: 44 ttgggtcctttaatctgattgagccgtgccaatatc 79
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 53 gtcctttaatttgattgagccgtgccaatatcat 86
|||||||||| |||||||||||||||||||||||
Sbjct: 57 gtcctttaatctgattgagccgtgccaatatcat 90
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 49 ttgggtcctttaatttgattgagccgtgccaatatca 85
||||||| |||||| ||||||||||||||||||||||
Sbjct: 56 ttgggtcgtttaatctgattgagccgtgccaatatca 92
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 49 ttgggtcctttaatttgattgagccgtgccaatatca 85
||||||| |||||| ||||||||||||||||||||||
Sbjct: 56 ttgggtcttttaatctgattgagccgtgccaatatca 92
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 53 gtcctttaatttgattgagccgtgccaatatca 85
|||||||| | ||||||||||||||||||||||
Sbjct: 64 gtcctttagtctgattgagccgtgccaatatca 96
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 61 atttgattgagccgtgccaatatca 85
|||||||||||||||||||||||||
Sbjct: 74 atttgattgagccgtgccaatatca 98
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 61 atttgattgagccgtgccaatatca 85
|||||||||||||||||||||||||
Sbjct: 64 atttgattgagccgtgccaatatca 88
>40457_gma-MIR171c:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 61 atttgattgagccgtgccaatatca 85
|||||||||||||||||||||||||
Sbjct: 69 atttgattgagccgtgccaatatca 93
>40361_rco-MIR171c:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 56 ctttaatttgattgagccgtgccaatatc 84
||||||| |||||||||||||||||||||
Sbjct: 54 ctttaatctgattgagccgtgccaatatc 82
>40062_ath-MIR171c:mirbase
Length = 116
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 61 atttgattgagccgtgccaatatca 85
|||||||||||||||||||||||||
Sbjct: 84 atttgattgagccgtgccaatatca 108
>42762_zma-MIR171b:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatca 85
||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatca 83
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatca 85
||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatca 83
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatca 85
||||||||||||||||||||||||
Sbjct: 120 tttgattgagccgtgccaatatca 143
>41983_osa-MIR171c:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatca 85
||||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatatca 90
>41982_osa-MIR171b:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatca 85
||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatca 91
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatca 85
||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatca 85
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatca 85
||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatca 88
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatca 85
||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatca 91
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 atttgattgagccgtgccaatatc 84
||||||||||||||||||||||||
Sbjct: 97 atttgattgagccgtgccaatatc 120
>41385_ptc-MIR171e:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 49 ttgggtcctttaatttgattgagccgtgccaatatc 84
|||||| |||| || |||||||||||||||||||||
Sbjct: 50 ttgggttctttcatctgattgagccgtgccaatatc 85
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatca 85
||||||||||||||||||||||||
Sbjct: 69 tttgattgagccgtgccaatatca 92
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatca 85
||||||||||||||||||||||||
Sbjct: 70 tttgattgagccgtgccaatatca 93
>41216_crt-MIR171:mirbase
Length = 201
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatca 85
||||||||||||||||||||||||
Sbjct: 159 tttgattgagccgtgccaatatca 182
>40360_rco-MIR171b:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatca 85
||||||||||||||||||||||||
Sbjct: 61 tttgattgagccgtgccaatatca 84
>40359_rco-MIR171a:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatca 85
||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatca 85
>40318_bra-MIR171a:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatca 85
||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatca 83
>40305_bol-MIR171a:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatca 85
||||||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatatca 89
>40289_bna-MIR171e:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatca 85
||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatca 88
>40288_bna-MIR171d:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatca 85
||||||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatatca 89
>39851_aly-MIR171c:mirbase
Length = 111
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatca 85
||||||||||||||||||||||||
Sbjct: 72 tttgattgagccgtgccaatatca 95
>42769_zma-MIR171i:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 ttgattgagccgtgccaatatca 85
|||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatca 86
>42766_zma-MIR171f:mirbase
Length = 155
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 ttgattgagccgtgccaatatca 85
|||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatca 136
>41538_sly-MIR171a:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatc 84
|||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatc 107
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 62 tttgattgagccgtgccaatatc 84
|||||||||||||||||||||||
Sbjct: 23 tttgattgagccgtgccaatatc 1
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatc 84
|||||||||||||||||||||||
Sbjct: 82 tttgattgagccgtgccaatatc 104
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatc 84
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatc 84
|||||||||||||||||||||||
Sbjct: 119 tttgattgagccgtgccaatatc 141
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatc 84
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatc 84
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>40695_mtr-MIR171:mirbase
Length = 114
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 4 ttgatgttggcgtggctcaatcaaatcaaacttct 38
||||||||||| || ||||||||||||||| ||||
Sbjct: 19 ttgatgttggcttgtctcaatcaaatcaaagttct 53
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 64 tgattgagccgtgccaatatcat 86
|||||||| ||||||||||||||
Sbjct: 75 tgattgagtcgtgccaatatcat 97
>40364_rco-MIR171f:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatc 84
|||||||||||||||||||||||
Sbjct: 84 tttgattgagccgtgccaatatc 106
>40362_rco-MIR171d:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatc 84
|||||||||||||||||||||||
Sbjct: 97 tttgattgagccgtgccaatatc 119
>42770_zma-MIR171j:mirbase
Length = 129
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 tgattgagccgtgccaatatca 85
||||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatca 111
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 tgattgagccgtgccaatatca 85
||||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatatca 114
>41986_osa-MIR171f:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 tgattgagccgtgccaatatca 85
||||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatatca 118
>40697_mtr-MIR171c:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatat 83
||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatat 99
>42765_zma-MIR171e:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 tgattgagccgtgccaatatc 84
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>42764_zma-MIR171d:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 tgattgagccgtgccaatatc 84
|||||||||||||||||||||
Sbjct: 82 tgattgagccgtgccaatatc 102
>42641_tae-MIR171b:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatca 85
|||||||||||||||||||||
Sbjct: 90 gattgagccgtgccaatatca 110
>42640_tae-MIR171a:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 tgattgagccgtgccaatatc 84
|||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatatc 109
>42554_sbi-MIR171i:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 tgattgagccgtgccaatatc 84
|||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88
>42549_sbi-MIR171d:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 tgattgagccgtgccaatatc 84
|||||||||||||||||||||
Sbjct: 114 tgattgagccgtgccaatatc 134
>41985_osa-MIR171e:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 tgattgagccgtgccaatatc 84
|||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatatc 109
>41984_osa-MIR171d:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 tgattgagccgtgccaatatc 84
|||||||||||||||||||||
Sbjct: 105 tgattgagccgtgccaatatc 125
>41890_hvu-MIR171:mirbase
Length = 173
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 tgattgagccgtgccaatatc 84
|||||||||||||||||||||
Sbjct: 112 tgattgagccgtgccaatatc 132
