miRNEST 2.0, an integrative microRNA resource :: BLAST
>40360_rco-MIR171b:mirbase
Length = 91
Score = 63.9 bits (32), Expect = 1e-11
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 atattggtgcggttcaatcggagaactttgctctttgtttagagagctatgttgtttgat 60
||||||||||||||||||| |||| | ||||||| | | ||||| | |||||||||||
Sbjct: 8 atattggtgcggttcaatcagagatcattgctctatatatagagcttt-tgttgtttgat 66
Query: 61 tgagccgtgccaatat 76
||||||||||||||||
Sbjct: 67 tgagccgtgccaatat 82
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 50 tgttgtttgattgagccgtgccaatat 76
|||||||||||||||||||||||||||
Sbjct: 60 tgttgtttgattgagccgtgccaatat 86
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 43 agagctatgttgtttgattgagccgtgccaatat 76
|||||| | |||||||||||||||||||||||||
Sbjct: 57 agagctctattgtttgattgagccgtgccaatat 90
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 atattggtgcggttcaatc 19
|||||||||||||||||||
Sbjct: 15 atattggtgcggttcaatc 33
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 51 gttgtttgattgagccgtgccaatat 76
||||||||||||||||||||||||||
Sbjct: 27 gttgtttgattgagccgtgccaatat 2
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 gttgtttgattgagccgtgccaatat 76
||||||||||||||||||||||||||
Sbjct: 74 gttgtttgattgagccgtgccaatat 99
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
|||||||||||||||||||||||||
Sbjct: 67 ttgtttgattgagccgtgccaatat 91
>40318_bra-MIR171a:mirbase
Length = 85
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
|||||||||||||||||||||||||
Sbjct: 57 ttgtttgattgagccgtgccaatat 81
>40305_bol-MIR171a:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
|||||||||||||||||||||||||
Sbjct: 63 ttgtttgattgagccgtgccaatat 87
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 atattggtgcggttcaatc 19
|||||||||||||||||||
Sbjct: 11 atattggtgcggttcaatc 29
>40289_bna-MIR171e:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
|||||||||||||||||||||||||
Sbjct: 62 ttgtttgattgagccgtgccaatat 86
>40288_bna-MIR171d:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
|||||||||||||||||||||||||
Sbjct: 63 ttgtttgattgagccgtgccaatat 87
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 atattggtgcggttcaatc 19
|||||||||||||||||||
Sbjct: 11 atattggtgcggttcaatc 29
>39851_aly-MIR171c:mirbase
Length = 111
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
|||||||||||||||||||||||||
Sbjct: 69 ttgtttgattgagccgtgccaatat 93
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 tgtttgattgagccgtgccaatat 76
||||||||||||||||||||||||
Sbjct: 118 tgtttgattgagccgtgccaatat 141
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 atattggtgcggttcaatcggaga 24
||||||||||||||||||||||||
Sbjct: 22 atattggtgcggttcaatcggaga 45
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 tgttgtttgattgagccgtgccaatat 76
|||| ||||||||||||||||||||||
Sbjct: 70 tgttatttgattgagccgtgccaatat 96
>41538_sly-MIR171a:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtttgattgagccgtgccaatat 76
|||||||||||||||||||||||
Sbjct: 84 gtttgattgagccgtgccaatat 106
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtttgattgagccgtgccaatat 76
|||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatat 99
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 tgttgtttgattgagccgtgccaatat 76
|||| ||||||||||||||||||||||
Sbjct: 60 tgttatttgattgagccgtgccaatat 86
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 atattggtgcggttcaatc 19
|||||||||||||||||||
Sbjct: 7 atattggtgcggttcaatc 25
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtttgattgagccgtgccaatat 76
|||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatat 99
>40457_gma-MIR171c:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 tgttgtttgattgagccgtgccaatat 76
|||| ||||||||||||||||||||||
Sbjct: 65 tgttatttgattgagccgtgccaatat 91
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 atattggtgcggttcaatc 19
|||||||||||||||||||
Sbjct: 14 atattggtgcggttcaatc 32
>40061_ath-MIR171b:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 tgttgtttgattgagccgtgccaatat 76
||||||| |||||||||||||||||||
Sbjct: 68 tgttgttcgattgagccgtgccaatat 94
>39850_aly-MIR171b:mirbase
Length = 137
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 tgttgtttgattgagccgtgccaatat 76
||||||| |||||||||||||||||||
Sbjct: 79 tgttgttcgattgagccgtgccaatat 105
>42762_zma-MIR171b:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatat 81
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatat 81
>41983_osa-MIR171c:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatat 88
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 atattggtgcggttcaatc 19
|||||||||||||||||||
Sbjct: 12 atattggtgcggttcaatc 30
>41982_osa-MIR171b:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatat 89
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatat 83
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatat 89
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 98 tttgattgagccgtgccaatat 119
>41216_crt-MIR171:mirbase
Length = 201
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 159 tttgattgagccgtgccaatat 180
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 82 tttgattgagccgtgccaatat 103
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 75 tttgattgagccgtgccaatat 96
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 119 tttgattgagccgtgccaatat 140
>40697_mtr-MIR171c:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatat 99
>40364_rco-MIR171f:mirbase
Length = 111
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 84 tttgattgagccgtgccaatat 105
>40362_rco-MIR171d:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 97 tttgattgagccgtgccaatat 118
>40359_rco-MIR171a:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatat 83
>40062_ath-MIR171c:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatat 106
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 atattggtgcggttcaatc 19
|||||||||||||||||||
Sbjct: 30 atattggtgcggttcaatc 48
>42769_zma-MIR171i:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 ttgattgagccgtgccaatat 76
|||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatat 84
>42766_zma-MIR171f:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 ttgattgagccgtgccaatat 76
|||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatat 134
>41182_aqc-MIR171f:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 44 gagctatgttgtttgattgagccgtgccaatat 76
||||| |||| ||| ||||||||||||||||||
Sbjct: 49 gagctttgttatttaattgagccgtgccaatat 81
>41179_aqc-MIR171c:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 5e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 44 gagctatgttgtttgattgagccgtgccaatat 76
||||| |||| ||| ||||||||||||||||||
Sbjct: 34 gagctttgttatttaattgagccgtgccaatat 2
>40321_bra-MIR171d:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
||||| |||||||||||||||||||
Sbjct: 65 ttgttcgattgagccgtgccaatat 89
>40320_bra-MIR171c:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
||||| |||||||||||||||||||
Sbjct: 59 ttgttcgattgagccgtgccaatat 83
>40319_bra-MIR171b:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
||||| |||||||||||||||||||
Sbjct: 66 ttgttcgattgagccgtgccaatat 90
>40287_bna-MIR171c:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
||||| |||||||||||||||||||
Sbjct: 59 ttgttcgattgagccgtgccaatat 83
>40286_bna-MIR171b:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
||||| |||||||||||||||||||
Sbjct: 65 ttgttcgattgagccgtgccaatat 89
>40285_bna-MIR171a:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
||||| |||||||||||||||||||
Sbjct: 66 ttgttcgattgagccgtgccaatat 90
>42770_zma-MIR171j:mirbase
Length = 129
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatat 109
>42765_zma-MIR171e:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatat 106
>42764_zma-MIR171d:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 82 tgattgagccgtgccaatat 101
>42640_tae-MIR171a:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatat 108
>42554_sbi-MIR171i:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatat 87
>42549_sbi-MIR171d:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 114 tgattgagccgtgccaatat 133
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatat 112
>41986_osa-MIR171f:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatat 116
