miRNEST 2.0, an integrative microRNA resource :: BLAST
>41528_sly-MIR159:mirbase
Length = 177
Score = 101 bits (51), Expect = 2e-22
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacagaggatctaacaggtaagattaagctgctgacctatgga 60
||||||||||||||||||||| | ||||||||||| | ||| |||||||||||||||||
Sbjct: 2 ggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgga 61
Query: 61 ttcctcagtcctatctatt 79
|||||||| ||||||||||
Sbjct: 62 ttcctcagccctatctatt 80
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 65.9 bits (33), Expect = 9e-12
Identities = 134/165 (81%), Gaps = 2/165 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacagaggatctaacaggtaagattaagctgctgacctatgga 60
||||||||||||||||||| ||||| ||| | || ||||||||||||| | |||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 61 ttcctcagtcctatctattatttgataggataggtaagtgggtagcatatgtcaggagct 120
||| ||||||||||||| | ||| ||||||||| | || | |||||| |||||||||
Sbjct: 72 -tccacagtcctatctatcaactga-aggataggtttgcggcttgcatatctcaggagct 129
Query: 121 acattaccctaagttggatcgcttattggatcgaagggagctcta 165
||| || | ||| |||| ||| |||||| |||||||||||||
Sbjct: 130 ttattgcctaatgttagatccctttttggattgaagggagctcta 174
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 61.9 bits (31), Expect = 1e-10
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacagaggatctaacaggtaagattaagctgctgacctatgga 60
||||||||||||||||||| ||||| ||| || || ||||| |||||||||| ||||||
Sbjct: 10 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 69
Query: 61 ttcctcagtcctatc 75
| || ||| ||||||
Sbjct: 70 tcccacagccctatc 84
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 60.0 bits (30), Expect = 5e-10
Identities = 67/78 (85%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacagaggatctaacaggtaagattaagctgctgacctatgga 60
||||||||||||||||||| ||||| ||| | || ||||||||||||| | |||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 61 ttcctcagtcctatctat 78
||| |||||||||||||
Sbjct: 72 -tccacagtcctatctat 88
>41218_csi-MIR159:mirbase
Length = 216
Score = 58.0 bits (29), Expect = 2e-09
Identities = 66/76 (86%), Gaps = 3/76 (3%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacagaggatctaaca--ggtaagattaagctgctgacctatg 58
||||||||||||||||||| ||||| |||| || ||||| ||| ||||||||| |||||
Sbjct: 13 ggagctccttgaagtccaaaagaggttctagcaagggtaa-attgagctgctgagctatg 71
Query: 59 gattcctcagtcctat 74
||| || |||||||||
Sbjct: 72 gatcccacagtcctat 87
>40338_rco-MIR159:mirbase
Length = 180
Score = 52.0 bits (26), Expect = 1e-07
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacagaggatctaacaggtaagattaagctgctgacctatgga 60
||||||||||||||||||| ||||||||| || ||||| ||||||||| |||||||
Sbjct: 5 ggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgga 64
Query: 61 ttcctcagtcctat 74
| || ||| |||||
Sbjct: 65 tcccacagccctat 78
>40397_ahy-MIR159:mirbase
Length = 197
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacagagg 25
|||||||||||||||||||||||||
Sbjct: 4 ggagctccttgaagtccaacagagg 28
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacagaggatct 29
||||||||||||||||||| ||||||||
Sbjct: 3 ggagctccttgaagtccaattgaggatct 31
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacagaggatct 29
||||||||||||||||||| ||||||||
Sbjct: 3 ggagctccttgaagtccaattgaggatct 31
>40432_gma-MIR159a:mirbase
Length = 214
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacagaggatct 29
||||||||||||||||||| ||||||||
Sbjct: 22 ggagctccttgaagtccaattgaggatct 50
>42693_zma-MIR159d:mirbase
Length = 217
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 145 attggatcgaagggagctct 164
||||||||||||||||||||
Sbjct: 41 attggatcgaagggagctct 22
>42692_zma-MIR159c:mirbase
Length = 217
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 145 attggatcgaagggagctct 164
||||||||||||||||||||
Sbjct: 41 attggatcgaagggagctct 22
>42495_sbi-MIR159b:mirbase
Length = 253
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 145 attggatcgaagggagctct 164
||||||||||||||||||||
Sbjct: 79 attggatcgaagggagctct 60
>42454_sof-MIR159c:mirbase
Length = 238
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 145 attggatcgaagggagctct 164
||||||||||||||||||||
Sbjct: 64 attggatcgaagggagctct 45
>41730_bdi-MIR159:mirbase
Length = 234
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 145 attggatcgaagggagctct 164
||||||||||||||||||||
Sbjct: 48 attggatcgaagggagctct 29
