miRNEST 2.0, an integrative microRNA resource :: BLAST
>40432_gma-MIR159a:mirbase
Length = 214
Score = 335 bits (169), Expect = 7e-93
Identities = 172/173 (99%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 81
Query: 61 tcccacagttctacccatcaataagtgcttttgtggtagtcttgtggcttccatatctgg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 82 tcccacagttctacccatcaataagtgcttttgtggtagtcttgtggcttccatatttgg 141
Query: 121 ggagcttcatttgcctttatagtattaaccttctttggattgaagggagctct 173
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 ggagcttcatttgcctttatagtattaaccttctttggattgaagggagctct 194
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 252 bits (127), Expect = 8e-68
Identities = 162/173 (93%), Gaps = 3/173 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 tcccacagttctacccatcaataagtgcttttgtggtagtcttgtggcttccatatctgg 120
|||||||||||||||||||| | | ||||||||||||||||||||||||||||||||
Sbjct: 63 tcccacagttctacccatcagcatg---ttttgtggtagtcttgtggcttccatatctgg 119
Query: 121 ggagcttcatttgcctttatagtattaaccttctttggattgaagggagctct 173
|||||||||| ||||| |||||||| | |||||||||||||||||||||||||
Sbjct: 120 ggagcttcatctgcctctatagtatcatccttctttggattgaagggagctct 172
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 252 bits (127), Expect = 8e-68
Identities = 162/173 (93%), Gaps = 3/173 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 tcccacagttctacccatcaataagtgcttttgtggtagtcttgtggcttccatatctgg 120
|||||||||||||||||||| | | ||||||||||||||||||||||||||||||||
Sbjct: 63 tcccacagttctacccatcagcatg---ttttgtggtagtcttgtggcttccatatctgg 119
Query: 121 ggagcttcatttgcctttatagtattaaccttctttggattgaagggagctct 173
|||||||||| ||||| |||||||| | |||||||||||||||||||||||||
Sbjct: 120 ggagcttcatctgcctctatagtatcatccttctttggattgaagggagctct 172
>40435_gma-MIR159d:mirbase
Length = 103
Score = 204 bits (103), Expect = 2e-53
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 34 gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 60
Query: 94 tggtagtcttgtggcttccatatctggggagcttcatttgcct 136
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggtagtcttgtggcttccatatctggggagcttcatttgcct 103
>40338_rco-MIR159:mirbase
Length = 180
Score = 87.7 bits (44), Expect = 3e-18
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 60
|||||||||||||||||||| ||||||||| ||||| ||||||||||| |||||||||
Sbjct: 5 ggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgga 64
Query: 61 tcccacag 68
||||||||
Sbjct: 65 tcccacag 72
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 149 ccttctttggattgaagggagctct 173
|||| ||||||||||||||||||||
Sbjct: 150 ccttgtttggattgaagggagctct 174
>40397_ahy-MIR159:mirbase
Length = 197
Score = 83.8 bits (42), Expect = 4e-17
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 60
||||||||||||||||||| |||| |||| ||||| ||||||||||| |||||||||
Sbjct: 4 ggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatgga 63
Query: 61 tcccacagttctacccat 78
||||||||| ||||||||
Sbjct: 64 tcccacagtactacccat 81
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 149 ccttctttggattgaagggagctct 173
|||| ||||||||||||||||||||
Sbjct: 152 ccttatttggattgaagggagctct 176
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 79.8 bits (40), Expect = 6e-16
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 60
|||||||||||||||||||| |||| ||||||||||| ||||||||||| | ||||||
Sbjct: 10 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 69
Query: 61 tcccacag 68
||||||||
Sbjct: 70 tcccacag 77
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 149 ccttctttggattgaagggagctct 173
|||| ||||||||||||||||||||
Sbjct: 155 ccttgtttggattgaagggagctct 179
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 69.9 bits (35), Expect = 6e-13
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 60
|||||||||||||||||||| |||| |||| |||||| ||| ||||||| |||||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 61 tcc 63
|||
Sbjct: 72 tcc 74
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 69.9 bits (35), Expect = 6e-13
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 60
|||||||||||||||||||| |||| |||| |||||| ||| ||||||| |||||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 61 tcc 63
|||
Sbjct: 72 tcc 74
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>41218_csi-MIR159:mirbase
Length = 216
Score = 60.0 bits (30), Expect = 6e-10
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaattgaggatcttact-gggtgaattgagctgcttagctatgg 59
||||||||||||||||||| |||| ||| | |||| |||||||||||| ||||||||
Sbjct: 13 ggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgg 72
Query: 60 atcccacagt 69
||||||||||
Sbjct: 73 atcccacagt 82
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctct 205
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 56.0 bits (28), Expect = 9e-09
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 60
|||||||||||||||||||| || | || | |||||| || |||||||| ||||||| |
Sbjct: 12 ggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaa 71
Query: 61 tcccacag 68
||||||||
Sbjct: 72 tcccacag 79
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 56.0 bits (28), Expect = 9e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 90 tttgtggtagtcttgtggcttccatatctggggagc 125
||||||||||| ||||||||||||||||| ||||||
Sbjct: 91 tttgtggtagttttgtggcttccatatctagggagc 126
>40311_bra-MIR159a:mirbase
Length = 185
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 150 cttctttggattgaagggagctct 173
||||||||||||||||||||||||
Sbjct: 159 cttctttggattgaagggagctct 182
>40261_bna-MIR159:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 150 cttctttggattgaagggagctct 173
||||||||||||||||||||||||
Sbjct: 157 cttctttggattgaagggagctct 180
>40017_ath-MIR159b:mirbase
Length = 196
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 150 cttctttggattgaagggagctct 173
||||||||||||||||||||||||
Sbjct: 164 cttctttggattgaagggagctct 187
>40016_ath-MIR159a:mirbase
Length = 184
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 150 cttctttggattgaagggagctct 173
||||||||||||||||||||||||
Sbjct: 159 cttctttggattgaagggagctct 182
>39805_aly-MIR159b:mirbase
Length = 202
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 150 cttctttggattgaagggagctct 173
||||||||||||||||||||||||
Sbjct: 165 cttctttggattgaagggagctct 188
>39804_aly-MIR159a:mirbase
Length = 222
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 150 cttctttggattgaagggagctct 173
||||||||||||||||||||||||
Sbjct: 179 cttctttggattgaagggagctct 202
>42695_zma-MIR159f:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 152 tctttggattgaagggagctct 173
||||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctct 213
>42690_zma-MIR159a:mirbase
Length = 246
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 152 tctttggattgaagggagctct 173
||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226
>42635_tae-MIR159b:mirbase
Length = 255
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 152 tctttggattgaagggagctct 173
||||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctct 249
>42494_sbi-MIR159:mirbase
Length = 226
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 152 tctttggattgaagggagctct 173
||||||||||||||||||||||
Sbjct: 202 tctttggattgaagggagctct 223
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 152 tctttggattgaagggagctct 173
||||||||||||||||||||||
Sbjct: 221 tctttggattgaagggagctct 242
>42455_sof-MIR159d:mirbase
Length = 265
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 152 tctttggattgaagggagctct 173
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>42453_sof-MIR159b:mirbase
Length = 266
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 152 tctttggattgaagggagctct 173
||||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctct 246
>42452_sof-MIR159a:mirbase
Length = 265
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 152 tctttggattgaagggagctct 173
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>41918_osa-MIR159b:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 152 tctttggattgaagggagctct 173
||||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctct 177
>41917_osa-MIR159a:mirbase
Length = 272
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 152 tctttggattgaagggagctct 173
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>41916_osa-MIR159a:mirbase
Length = 272
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 152 tctttggattgaagggagctct 173
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>41868_far-MIR159:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 152 tctttggattgaagggagctct 173
||||||||||||||||||||||
Sbjct: 167 tctttggattgaagggagctct 188
