miRNEST 2.0, an integrative microRNA resource :: BLAST
>41683_vvi-MIR408:mirbase
Length = 107
Score = 56.0 bits (28), Expect = 4e-09
Identities = 76/91 (83%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 1 agacagggacgaggtagagcatggatggagttcccaacagaaca--gtcaagctgttgtg 58
|||| |||||||||||| ||||||||||| | ||||||| | || |||||||| |
Sbjct: 8 agacggggacgaggtagtgcatggatggaactattaacagaagaatgttaagctgttttt 67
Query: 59 gctccactcatgcactgcctcttccctggct 89
|||| || |||||||||||||||||||||||
Sbjct: 68 gctctacccatgcactgcctcttccctggct 98
>41252_csi-MIR408:mirbase
Length = 153
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 51 ctgttgtggctccactcatgcactgcctcttccctggct 89
||||| ||||||| | |||||||||||||||||||||||
Sbjct: 103 ctgttttggctcctcccatgcactgcctcttccctggct 141
>41463_ptc-MIR408:mirbase
Length = 105
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 52 tgttgtggctccactcatgcactgcctcttccctggct 89
|||| |||||| || |||||||||||||||||||||||
Sbjct: 60 tgttttggctctacccatgcactgcctcttccctggct 97
>40405_ahy-MIR408:mirbase
Length = 122
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 65 ctcatgcactgcctcttccctggct 89
|||||||||||||||||||||||||
Sbjct: 78 ctcatgcactgcctcttccctggct 102
>40404_ahy-MIR408:mirbase
Length = 122
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 65 ctcatgcactgcctcttccctggct 89
|||||||||||||||||||||||||
Sbjct: 78 ctcatgcactgcctcttccctggct 102
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 65 ctcatgcactgcctcttccctggct 89
|||||||||||||||||||||||||
Sbjct: 90 ctcatgcactgcctcttccctggct 114
>41193_aqc-MIR408:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 67 catgcactgcctcttccctggct 89
|||||||||||||||||||||||
Sbjct: 23 catgcactgcctcttccctggct 1
>40391_rco-MIR408:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 4e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 51 ctgttgtggctccactcatgcactgcctcttccctggct 89
||||| |||||| || | |||||||||||||||||||||
Sbjct: 50 ctgttttggctctacccctgcactgcctcttccctggct 88
>40108_ath-MIR408:mirbase
Length = 218
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 catgcactgcctcttccctggct 89
|||||||||||||||||||||||
Sbjct: 119 catgcactgcctcttccctggct 141
>39897_aly-MIR408:mirbase
Length = 211
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 catgcactgcctcttccctggct 89
|||||||||||||||||||||||
Sbjct: 116 catgcactgcctcttccctggct 138
>39742_smo-MIR408:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 atgcactgcctcttccctggct 89
||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggct 97
>39428_pta-MIR408:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 atgcactgcctcttccctggct 89
||||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggct 85
>42830_zma-MIR408b:mirbase
Length = 147
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tgcactgcctcttccctggct 89
|||||||||||||||||||||
Sbjct: 126 tgcactgcctcttccctggct 146
>42829_zma-MIR408:mirbase
Length = 191
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tgcactgcctcttccctggct 89
|||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggct 173
>42647_tae-MIR408:mirbase
Length = 187
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tgcactgcctcttccctggct 89
|||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggct 157
>42600_sbi-MIR408:mirbase
Length = 205
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tgcactgcctcttccctggct 89
|||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205
>42474_ssp-MIR408d:mirbase
Length = 180
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tgcactgcctcttccctggct 89
|||||||||||||||||||||
Sbjct: 159 tgcactgcctcttccctggct 179
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agacagggacgaggtagagcatgg 24
|||||||||||||| |||||||||
Sbjct: 2 agacagggacgaggcagagcatgg 25
>42473_ssp-MIR408a:mirbase
Length = 248
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tgcactgcctcttccctggct 89
|||||||||||||||||||||
Sbjct: 227 tgcactgcctcttccctggct 247
>42465_sof-MIR408d:mirbase
Length = 215
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tgcactgcctcttccctggct 89
|||||||||||||||||||||
Sbjct: 177 tgcactgcctcttccctggct 197
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agacagggacgaggtagagcatgg 24
|||||||||||||| |||||||||
Sbjct: 20 agacagggacgaggcagagcatgg 43
>42464_sof-MIR408c:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tgcactgcctcttccctggct 89
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>42463_sof-MIR408b:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tgcactgcctcttccctggct 89
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>42462_sof-MIR408a:mirbase
Length = 283
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tgcactgcctcttccctggct 89
|||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggct 265
>42052_osa-MIR408:mirbase
Length = 213
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tgcactgcctcttccctggct 89
|||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggct 174
