miRNEST 2.0, an integrative microRNA resource :: BLAST
>41528_sly-MIR159:mirbase
Length = 177
Score = 99.6 bits (50), Expect = 6e-22
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagaggatctaacaggtaagattaagctgctgacctatggat 60
|||||||||||||||||||| | ||||||||||| | ||| ||||||||||||||||||
Sbjct: 3 gagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatggat 62
Query: 61 tcctcagtcctatctatt 78
||||||| ||||||||||
Sbjct: 63 tcctcagccctatctatt 80
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 60.0 bits (30), Expect = 5e-10
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagaggatctaacaggtaagattaagctgctgacctatggat 60
|||||||||||||||||| ||||| ||| || || ||||| |||||||||| |||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 61 tcctcagtcctatc 74
|| ||| ||||||
Sbjct: 71 cccacagccctatc 84
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 60.0 bits (30), Expect = 5e-10
Identities = 131/162 (80%), Gaps = 2/162 (1%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagaggatctaacaggtaagattaagctgctgacctatggat 60
|||||||||||||||||| ||||| ||| | || ||||||||||||| | |||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga- 71
Query: 61 tcctcagtcctatctattatttgataggataggtaagtgggtagcatatgtcaggagcta 120
||| ||||||||||||| | ||| ||||||||| | || | |||||| |||||||||
Sbjct: 72 tccacagtcctatctatcaactga-aggataggtttgcggcttgcatatctcaggagctt 130
Query: 121 cattaccctaagttggatcgcttattggatcgaagggagctc 162
||| || | ||| |||| ||| |||||| |||||||||||
Sbjct: 131 tattgcctaatgttagatccctttttggattgaagggagctc 172
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 58.0 bits (29), Expect = 2e-09
Identities = 66/77 (85%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagaggatctaacaggtaagattaagctgctgacctatggat 60
|||||||||||||||||| ||||| ||| | || ||||||||||||| | |||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga- 71
Query: 61 tcctcagtcctatctat 77
||| |||||||||||||
Sbjct: 72 tccacagtcctatctat 88
>41218_csi-MIR159:mirbase
Length = 216
Score = 56.0 bits (28), Expect = 8e-09
Identities = 65/75 (86%), Gaps = 3/75 (4%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagaggatctaaca--ggtaagattaagctgctgacctatgg 58
|||||||||||||||||| ||||| |||| || ||||| ||| ||||||||| ||||||
Sbjct: 14 gagctccttgaagtccaaaagaggttctagcaagggtaa-attgagctgctgagctatgg 72
Query: 59 attcctcagtcctat 73
|| || |||||||||
Sbjct: 73 atcccacagtcctat 87
>40338_rco-MIR159:mirbase
Length = 180
Score = 50.1 bits (25), Expect = 5e-07
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagaggatctaacaggtaagattaagctgctgacctatggat 60
|||||||||||||||||| ||||||||| || ||||| ||||||||| ||||||||
Sbjct: 6 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 65
Query: 61 tcctcagtcctat 73
|| ||| |||||
Sbjct: 66 cccacagccctat 78
>40397_ahy-MIR159:mirbase
Length = 197
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagagg 24
||||||||||||||||||||||||
Sbjct: 5 gagctccttgaagtccaacagagg 28
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagaggatct 28
|||||||||||||||||| ||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatct 31
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagaggatct 28
|||||||||||||||||| ||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatct 31
>40432_gma-MIR159a:mirbase
Length = 214
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagaggatct 28
|||||||||||||||||| ||||||||
Sbjct: 23 gagctccttgaagtccaattgaggatct 50
