miRNEST 2.0, an integrative microRNA resource :: BLAST
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 67.9 bits (34), Expect = 1e-12
Identities = 67/77 (87%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 1 atgttggcgtggctcaatcaaatcaaacttctcaactgtttattgggtcctttaatttga 60
||||||| |||||||||||||||||| || ||| ||| |||||||||||||| |||
Sbjct: 14 atgttggaatggctcaatcaaatcaaatctcccaagggtt--ttgggtcctttaatctga 71
Query: 61 ttgagccgtgccaatat 77
|||||||||||||||||
Sbjct: 72 ttgagccgtgccaatat 88
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 42 attgggtcctttaatttgattgagccgtgccaatat 77
||||||||||||||| ||||||||||||||||||||
Sbjct: 39 attgggtcctttaatctgattgagccgtgccaatat 74
>40363_rco-MIR171e:mirbase
Length = 84
Score = 61.9 bits (31), Expect = 6e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 43 ttgggtcctttaatttgattgagccgtgccaatat 77
|||||||||||||| ||||||||||||||||||||
Sbjct: 44 ttgggtcctttaatctgattgagccgtgccaatat 78
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 60.0 bits (30), Expect = 2e-10
Identities = 68/78 (87%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 1 atgttggcgtggctcaatcaaatcaaacttctcaa-ctgtttattgggtcctttaatttg 59
||||||| |||||||||||||||||| || ||| || ||||| |||| |||||||||
Sbjct: 20 atgttggaatggctcaatcaaatcaaatctcccaagctttttat-gggtgttttaatttg 78
Query: 60 attgagccgtgccaatat 77
||||||||||||||||||
Sbjct: 79 attgagccgtgccaatat 96
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 47 gtcctttaatttgattgagccgtgccaatat 77
|||||||||| ||||||||||||||||||||
Sbjct: 57 gtcctttaatctgattgagccgtgccaatat 87
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 54.0 bits (27), Expect = 1e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 43 ttgggtcctttaatttgattgagccgtgccaatat 77
||||||| |||||| ||||||||||||||||||||
Sbjct: 56 ttgggtcgtttaatctgattgagccgtgccaatat 90
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 54.0 bits (27), Expect = 1e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 43 ttgggtcctttaatttgattgagccgtgccaatat 77
||||||| |||||| ||||||||||||||||||||
Sbjct: 56 ttgggtcttttaatctgattgagccgtgccaatat 90
>40361_rco-MIR171c:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 50 ctttaatttgattgagccgtgccaatat 77
||||||| ||||||||||||||||||||
Sbjct: 54 ctttaatctgattgagccgtgccaatat 81
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 atttgattgagccgtgccaatat 77
|||||||||||||||||||||||
Sbjct: 97 atttgattgagccgtgccaatat 119
>41385_ptc-MIR171e:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 3e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 43 ttgggtcctttaatttgattgagccgtgccaatat 77
|||||| |||| || ||||||||||||||||||||
Sbjct: 50 ttgggttctttcatctgattgagccgtgccaatat 84
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 46.1 bits (23), Expect = 3e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 47 gtcctttaatttgattgagccgtgccaatat 77
|||||||| | ||||||||||||||||||||
Sbjct: 64 gtcctttagtctgattgagccgtgccaatat 94
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 atttgattgagccgtgccaatat 77
|||||||||||||||||||||||
Sbjct: 74 atttgattgagccgtgccaatat 96
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 atttgattgagccgtgccaatat 77
|||||||||||||||||||||||
Sbjct: 64 atttgattgagccgtgccaatat 86
>40457_gma-MIR171c:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 atttgattgagccgtgccaatat 77
|||||||||||||||||||||||
Sbjct: 69 atttgattgagccgtgccaatat 91
>40062_ath-MIR171c:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 atttgattgagccgtgccaatat 77
|||||||||||||||||||||||
Sbjct: 84 atttgattgagccgtgccaatat 106
>42762_zma-MIR171b:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatat 81
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatat 81
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 120 tttgattgagccgtgccaatat 141
>41983_osa-MIR171c:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatat 88
>41982_osa-MIR171b:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatat 89
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatat 83
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatat 86
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatat 89
>41538_sly-MIR171a:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatat 106
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 69 tttgattgagccgtgccaatat 90
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 70 tttgattgagccgtgccaatat 91
>41216_crt-MIR171:mirbase
Length = 201
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 159 tttgattgagccgtgccaatat 180
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 23 tttgattgagccgtgccaatat 2
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 82 tttgattgagccgtgccaatat 103
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatat 99
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 119 tttgattgagccgtgccaatat 140
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatat 99
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatat 99
>40697_mtr-MIR171c:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatat 99
>40364_rco-MIR171f:mirbase
Length = 111
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 84 tttgattgagccgtgccaatat 105
>40362_rco-MIR171d:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 97 tttgattgagccgtgccaatat 118
>40360_rco-MIR171b:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 61 tttgattgagccgtgccaatat 82
>40359_rco-MIR171a:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatat 83
>40318_bra-MIR171a:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatat 81
>40305_bol-MIR171a:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatat 87
>40289_bna-MIR171e:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatat 86
>40288_bna-MIR171d:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatat 87
>39851_aly-MIR171c:mirbase
Length = 111
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 72 tttgattgagccgtgccaatat 93
>42769_zma-MIR171i:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 ttgattgagccgtgccaatat 77
|||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatat 84
>42766_zma-MIR171f:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 ttgattgagccgtgccaatat 77
|||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatat 134
>42770_zma-MIR171j:mirbase
Length = 129
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatat 77
||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatat 109
>42765_zma-MIR171e:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatat 77
||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatat 106
>42764_zma-MIR171d:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatat 77
||||||||||||||||||||
Sbjct: 82 tgattgagccgtgccaatat 101
>42640_tae-MIR171a:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatat 77
||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatat 108
>42554_sbi-MIR171i:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatat 77
||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatat 87
>42549_sbi-MIR171d:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatat 77
||||||||||||||||||||
Sbjct: 114 tgattgagccgtgccaatat 133
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatat 77
||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatat 112
>41986_osa-MIR171f:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatat 77
||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatat 116
>41985_osa-MIR171e:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatat 77
||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatat 108
>41984_osa-MIR171d:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatat 77
||||||||||||||||||||
Sbjct: 105 tgattgagccgtgccaatat 124
>41890_hvu-MIR171:mirbase
Length = 173
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatat 77
||||||||||||||||||||
Sbjct: 112 tgattgagccgtgccaatat 131
>41874_far-MIR171:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatat 77
||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatat 109
>41765_bdi-MIR171b:mirbase
Length = 164
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatat 77
||||||||||||||||||||
Sbjct: 114 tgattgagccgtgccaatat 133
>41386_ptc-MIR171f:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatat 77
||||||||||||||||||||
Sbjct: 101 tgattgagccgtgccaatat 120
>41123_tcc-MIR171h:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatat 77
||||||||||||||||||||
Sbjct: 95 tgattgagccgtgccaatat 114
>40695_mtr-MIR171:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 atgttggcgtggctcaatcaaatcaaacttct 32
|||||||| || ||||||||||||||| ||||
Sbjct: 22 atgttggcttgtctcaatcaaatcaaagttct 53
