miRNEST 2.0, an integrative microRNA resource :: BLAST
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 77.8 bits (39), Expect = 2e-15
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatgaa 60
||||||||||||||||||||||||| | |||| ||| ||| ||||||||||||||||||
Sbjct: 12 ggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaa 71
Query: 61 ttccaca 67
| |||||
Sbjct: 72 tcccaca 78
Score = 50.1 bits (25), Expect = 5e-07
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 106 ggcttgcatacctcaggagctgcattacctga-gttgcatcatgttttggattgaaggga 164
|||||||||| |||||||||| ||||||| | ||| ||| | ||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagctttattacctaatgttagatctttttttggattgaaggga 172
Query: 165 gctct 169
|||||
Sbjct: 173 gctct 177
>40338_rco-MIR159:mirbase
Length = 180
Score = 77.8 bits (39), Expect = 2e-15
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatgaa 60
||||||||||||||||||||||| ||| ||| | ||| |||||||||||||||||||| |
Sbjct: 5 ggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgga 64
Query: 61 ttccaca 67
| |||||
Sbjct: 65 tcccaca 71
Score = 65.9 bits (33), Expect = 9e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 95 gataggcttgtggcttgcatacctcaggagctgcattacct 135
||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 99 gataggcttgtggcttgcatatctcaggagcttcattacct 139
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 95 gataggcttgtggcttgcatacctcaggagctgcatta 132
||||||||||||||||||||| ||||||||||||||||
Sbjct: 104 gataggcttgtggcttgcatatctcaggagctgcatta 141
Score = 56.0 bits (28), Expect = 9e-09
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctga 52
||||||||||||||||||||||| | | || || ||| ||||||||||||||
Sbjct: 10 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctga 61
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 65.9 bits (33), Expect = 9e-12
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatgaa 60
|||||||||||||||||||| || ||| || || ||| |||||||||||| ||||||| |
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 ttccacacttcta 73
| ||||| |||||
Sbjct: 63 tcccacagttcta 75
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctct 172
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 65.9 bits (33), Expect = 9e-12
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatgaa 60
|||||||||||||||||||| || ||| || || ||| |||||||||||| ||||||| |
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 ttccacacttcta 73
| ||||| |||||
Sbjct: 63 tcccacagttcta 75
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctct 172
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 60.0 bits (30), Expect = 6e-10
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatg 58
||||||||||||||||||||||| | | ||||| ||| |||| ||||||| |||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 149 ttttggattgaagggagctct 169
|||||||||||||||||||||
Sbjct: 153 ttttggattgaagggagctct 173
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 60.0 bits (30), Expect = 6e-10
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatg 58
||||||||||||||||||||||| | | ||||| ||| |||| ||||||| |||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 149 ttttggattgaagggagctct 169
|||||||||||||||||||||
Sbjct: 153 ttttggattgaagggagctct 173
>40432_gma-MIR159a:mirbase
Length = 214
Score = 58.0 bits (29), Expect = 2e-09
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatgaa 60
|||||||||||||||||||| || ||| || || ||| ||||||||||| ||||||| |
Sbjct: 22 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 81
Query: 61 ttccacacttcta 73
| ||||| |||||
Sbjct: 82 tcccacagttcta 94
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctct 194
>40397_ahy-MIR159:mirbase
Length = 197
Score = 54.0 bits (27), Expect = 3e-08
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatgaa 60
||||||||||||||||||| ||| | | ||| | ||| |||||||||||| ||||||| |
Sbjct: 4 ggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatgga 63
Query: 61 ttccaca 67
| |||||
Sbjct: 64 tcccaca 70
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>42635_tae-MIR159b:mirbase
Length = 255
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 95 gataggcttgtggcttgcatacctcaggagctgcat 130
||||||||| |||||||||| || ||||||||||||
Sbjct: 175 gataggcttatggcttgcatgccccaggagctgcat 210
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctct 249
>41917_osa-MIR159a:mirbase
Length = 272
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 95 gataggcttgtggcttgcatacctcaggagctgcat 130
||||||||| |||||||||| || ||||||||||||
Sbjct: 187 gataggcttatggcttgcatgccccaggagctgcat 222
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctct 261
>41916_osa-MIR159a:mirbase
Length = 272
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 95 gataggcttgtggcttgcatacctcaggagctgcat 130
||||||||| |||||||||| || ||||||||||||
Sbjct: 187 gataggcttatggcttgcatgccccaggagctgcat 222
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctct 261
>41218_csi-MIR159:mirbase
Length = 216
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 gatgataggcttgtggcttgcata 115
||||||||||||||||||||||||
Sbjct: 122 gatgataggcttgtggcttgcata 145
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 149 ttttggattgaagggagctct 169
|||||||||||||||||||||
Sbjct: 185 ttttggattgaagggagctct 205
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 40 attgagctgctgagctatgaattccaca 67
||||||||||||||||||| || |||||
Sbjct: 53 attgagctgctgagctatggatcccaca 80
>41528_sly-MIR159:mirbase
Length = 177
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 143 atcatgttttggattgaagggagctct 169
||||| |||||||||||||||||||||
Sbjct: 150 atcattttttggattgaagggagctct 176
