miRNEST 2.0, an integrative microRNA resource :: BLAST
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 305 bits (154), Expect = 5e-84
Identities = 157/158 (99%)
Strand = Plus / Plus
Query: 3 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 74
Query: 63 acagccctatctatcaactgaaggataggtttgcggcttgcatatctcaggagctttatt 122
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 acagtcctatctatcaactgaaggataggtttgcggcttgcatatctcaggagctttatt 134
Query: 123 gcctaatgttagatccctttttggattgaagggagctc 160
||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gcctaatgttagatccctttttggattgaagggagctc 172
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 297 bits (150), Expect = 1e-81
Identities = 156/158 (98%)
Strand = Plus / Plus
Query: 3 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 74
Query: 63 acagccctatctatcaactgaaggataggtttgcggcttgcatatctcaggagctttatt 122
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 acagtcctatctatcaaccgaaggataggtttgcggcttgcatatctcaggagctttatt 134
Query: 123 gcctaatgttagatccctttttggattgaagggagctc 160
||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gcctaatgttagatccctttttggattgaagggagctc 172
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 109 bits (55), Expect = 6e-25
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 94 tgcggcttgcatatctcaggagctttattgcctaatgttagatccctttttggattgaag 153
||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 110 tgcggcttgcatatctcaggagctttattacctaatgttagatctttttttggattgaag 169
Query: 154 ggagctc 160
|||||||
Sbjct: 170 ggagctc 176
>40338_rco-MIR159:mirbase
Length = 180
Score = 93.7 bits (47), Expect = 4e-20
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 3 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat-c 61
|||||||||||||||||||||| ||||| |||||||||| ||||||| |||||||||| |
Sbjct: 8 gctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggatcc 67
Query: 62 cacagccctat 72
|||||||||||
Sbjct: 68 cacagccctat 78
>40397_ahy-MIR159:mirbase
Length = 197
Score = 87.7 bits (44), Expect = 2e-18
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 3 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 62
|||||||||||||||| ||||| ||||| |||||||||| ||||||||||||||||||||
Sbjct: 7 gctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatggatcc 66
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 133 agatccctttttggattgaagggagctc 160
|||||| | |||||||||||||||||||
Sbjct: 148 agatccttatttggattgaagggagctc 175
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 79.8 bits (40), Expect = 6e-16
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 3 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat-c 61
|||||||||||||||||||||| |||| ||||||||||| ||||||| | ||||||| |
Sbjct: 13 gctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggatcc 72
Query: 62 cacagccctatc 73
||||||||||||
Sbjct: 73 cacagccctatc 84
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 71.9 bits (36), Expect = 1e-13
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 3 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 62
||||||||||||||||| |||| |||| |||||| |||| ||||||| ||||||||||||
Sbjct: 6 gctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggatcc 65
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 71.9 bits (36), Expect = 1e-13
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 3 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 62
||||||||||||||||| |||| |||| |||||| |||| ||||||| ||||||||||||
Sbjct: 6 gctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggatcc 65
>40432_gma-MIR159a:mirbase
Length = 214
Score = 63.9 bits (32), Expect = 3e-11
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 3 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 62
||||||||||||||||| |||| |||| |||||| ||| ||||||| ||||||||||||
Sbjct: 25 gctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggatcc 84
>41218_csi-MIR159:mirbase
Length = 216
Score = 60.0 bits (30), Expect = 5e-10
Identities = 68/78 (87%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 3 gctccttgaagtccaatagaggttcttgc-tgggtagattaagctgctaagctatggat- 60
|||||||||||||||| ||||||||| || ||||| ||| ||||||| ||||||||||
Sbjct: 16 gctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatggatc 75
Query: 61 ccacagccctatctatca 78
|||||| ||||| |||||
Sbjct: 76 ccacagtcctatgtatca 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 140 tttttggattgaagggagctc 160
|||||||||||||||||||||
Sbjct: 184 tttttggattgaagggagctc 204
>39804_aly-MIR159a:mirbase
Length = 222
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 97 ggcttgcatatctcaggagcttta 120
||||||||||||||||||||||||
Sbjct: 131 ggcttgcatatctcaggagcttta 154
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 42 aagctgctaagctatggatcc 62
|||||||||||||||||||||
Sbjct: 65 aagctgctaagctatggatcc 85
>41528_sly-MIR159:mirbase
Length = 177
Score = 44.1 bits (22), Expect = 3e-05
Identities = 64/77 (83%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 86 gataggtttgcggcttgcatatctcaggagcttta--ttgcctaatgttagatccctttt 143
||||||||| || |||||||| |||||||||||| || || |||| |||| ||||
Sbjct: 99 gataggttttgggtttgcatatgtcaggagctttattttaccctttgtttgatcattttt 158
Query: 144 tggattgaagggagctc 160
|||||||||||||||||
Sbjct: 159 tggattgaagggagctc 175
>40017_ath-MIR159b:mirbase
Length = 196
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 42 aagctgctaagctatggatcc 62
|||||||||||||||||||||
Sbjct: 47 aagctgctaagctatggatcc 67
>40016_ath-MIR159a:mirbase
Length = 184
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 42 aagctgctaagctatggatcc 62
|||||||||||||||||||||
Sbjct: 46 aagctgctaagctatggatcc 66
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 100 ttgcatatctcaggagcttta 120
|||||||||||||||||||||
Sbjct: 114 ttgcatatctcaggagcttta 134
>39805_aly-MIR159b:mirbase
Length = 202
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 42 aagctgctaagctatggatcc 62
|||||||||||||||||||||
Sbjct: 59 aagctgctaagctatggatcc 79
>42635_tae-MIR159b:mirbase
Length = 255
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 137 ccctttttggattgaagggagctc 160
|||| |||||||||||||||||||
Sbjct: 225 ccctctttggattgaagggagctc 248
