miRNEST 2.0, an integrative microRNA resource :: BLAST
>41215_crt-MIR168:mirbase
Length = 201
Score = 135 bits (68), Expect = 1e-32
Identities = 82/89 (92%)
Strand = Plus / Plus
Query: 53 gacagcgaggtggcgtgttgtaattggtcgtcacgtttaaattaatgattgnnnnnnntg 112
||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 73 gacagcgaggtggcgtgttgtaattggtcgtcacgtttaaattaatgattgaaaaaaatg 132
Query: 113 cgaattggatcccgccttgcatcaactga 141
|||||||||||||||||||||||||||||
Sbjct: 133 cgaattggatcccgccttgcatcaactga 161
>41210_ccl-MIR168:mirbase
Length = 176
Score = 135 bits (68), Expect = 1e-32
Identities = 82/89 (92%)
Strand = Plus / Plus
Query: 53 gacagcgaggtggcgtgttgtaattggtcgtcacgtttaaattaatgattgnnnnnnntg 112
||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 72 gacagcgaggtggcgtgttgtaattggtcgtcacgtttaaattaatgattgaaaaaaatg 131
Query: 113 cgaattggatcccgccttgcatcaactga 141
|||||||||||||||||||||||||||||
Sbjct: 132 cgaattggatcccgccttgcatcaactga 160
>41101_tcc-MIR168:mirbase
Length = 167
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgattggct 31
|||||||||||||||||||||||||||||||
Sbjct: 21 tcgcttggtgcaggtcgggaactgattggct 51
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 113 cgaattggatcccgccttgcatcaactga 141
|||||||||||||||||||||||||||||
Sbjct: 117 cgaattggatcccgccttgcatcaactga 145
>40355_rco-MIR168:mirbase
Length = 131
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgattggct 31
|||||||||||||||||||||||||||||||
Sbjct: 6 tcgcttggtgcaggtcgggaactgattggct 36
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 114 gaattggatcccgccttgcatcaactga 141
||||||||||||||||||||||||||||
Sbjct: 97 gaattggatcccgccttgcatcaactga 124
>40271_bna-MIR168:mirbase
Length = 133
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgattggct 31
|||||||||||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaactgattggct 48
>40044_ath-MIR168b:mirbase
Length = 124
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgattggct 31
|||||||||||||||||||||||||||||||
Sbjct: 19 tcgcttggtgcaggtcgggaactgattggct 49
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 112 gcgaattggatcccgccttgcatcaactga 141
||||||||||||||||||||||||||||||
Sbjct: 123 gcgaattggatcccgccttgcatcaactga 152
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgatt 27
|||||||||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcgggaactgatt 37
>40448_gma-MIR168:mirbase
Length = 125
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 113 cgaattggatcccgccttgcatcaactga 141
|||||||||||||||||||||||||||||
Sbjct: 78 cgaattggatcccgccttgcatcaactga 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 19 tcgcttggtgcaggtcgggaac 40
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 114 gaattggatcccgccttgcatcaactga 141
||||||||||||||||||||||||||||
Sbjct: 101 gaattggatcccgccttgcatcaactga 128
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgatt 27
|||||||||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcgggaactgatt 37
>39833_aly-MIR168b:mirbase
Length = 176
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgatt 27
|||||||||||||||||||||||||||
Sbjct: 43 tcgcttggtgcaggtcgggaactgatt 69
>40043_ath-MIR168a:mirbase
Length = 138
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 116 attggatcccgccttgcatcaactga 141
||||||||||||||||||||||||||
Sbjct: 96 attggatcccgccttgcatcaactga 121
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaac 39
>39832_aly-MIR168a:mirbase
Length = 155
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 116 attggatcccgccttgcatcaactga 141
||||||||||||||||||||||||||
Sbjct: 102 attggatcccgccttgcatcaactga 127
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 24 tcgcttggtgcaggtcgggaac 45
>41596_vvi-MIR168:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcgggaac 32
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 120 gatcccgccttgcatcaactga 141
||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactga 120
