miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41251_csi-MIR403:mirbase
Length = 130
Score = 216 bits (109), Expect = 3e-57
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 1 cgggtttgtgcgtgaatttaataaaataaccgcttcttttaatctcgttcccccattttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 cgggtttgtgcgtgaatttaataaaataaccgcttcttttaatctcgttcccccattttt 71
Query: 61 tgttagtaacaaatttttgccgtcagtgttagattcacgcacaaactcg 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 tgttagtaacaaatttttgccgtcagtgttagattcacgcacaaactcg 120
>41680_vvi-MIR403d:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 86 gtgttagattcacgcacaaactcg 109
||||||||||||||||||||||||
Sbjct: 53 gtgttagattcacgcacaaactcg 76
>41678_vvi-MIR403b:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 86 gtgttagattcacgcacaaactcg 109
||||||||||||||||||||||||
Sbjct: 53 gtgttagattcacgcacaaactcg 76
>41156_tcc-MIR403b:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 86 gtgttagattcacgcacaaactcg 109
||||||||||||||||||||||||
Sbjct: 80 gtgttagattcacgcacaaactcg 103
>41155_tcc-MIR403a:mirbase
Length = 126
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 ggtttgtgcgtgaatttaataaaa 26
||||||||||||||||||||||||
Sbjct: 21 ggtttgtgcgtgaatttaataaaa 44
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 tgttagattcacgcacaaactcg 109
|||||||||||||||||||||||
Sbjct: 84 tgttagattcacgcacaaactcg 106
>40390_rco-MIR403b:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 86 gtgttagattcacgcacaaactcg 109
||||||||||||||||||||||||
Sbjct: 70 gtgttagattcacgcacaaactcg 93
>40389_rco-MIR403a:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 86 gtgttagattcacgcacaaactcg 109
||||||||||||||||||||||||
Sbjct: 67 gtgttagattcacgcacaaactcg 90
>41681_vvi-MIR403e:mirbase
Length = 115
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 gttagattcacgcacaaactcg 109
||||||||||||||||||||||
Sbjct: 84 gttagattcacgcacaaactcg 105
>41679_vvi-MIR403c:mirbase
Length = 115
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 gttagattcacgcacaaactcg 109
||||||||||||||||||||||
Sbjct: 84 gttagattcacgcacaaactcg 105
>41677_vvi-MIR403a:mirbase
Length = 115
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 gttagattcacgcacaaactcg 109
||||||||||||||||||||||
Sbjct: 84 gttagattcacgcacaaactcg 105
>41461_ptc-MIR403b:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 gttagattcacgcacaaactcg 109
||||||||||||||||||||||
Sbjct: 70 gttagattcacgcacaaactcg 91
>41682_vvi-MIR403f:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 89 ttagattcacgcacaaactcg 109
|||||||||||||||||||||
Sbjct: 78 ttagattcacgcacaaactcg 98
>41462_ptc-MIR403c:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 89 ttagattcacgcacaaactcg 109
|||||||||||||||||||||
Sbjct: 59 ttagattcacgcacaaactcg 79
>41460_ptc-MIR403a:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 89 ttagattcacgcacaaactcg 109
|||||||||||||||||||||
Sbjct: 103 ttagattcacgcacaaactcg 123
>40101_ath-MIR403:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 89 ttagattcacgcacaaactcg 109
|||||||||||||||||||||
Sbjct: 103 ttagattcacgcacaaactcg 123
>39896_aly-MIR403:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 89 ttagattcacgcacaaactcg 109
|||||||||||||||||||||
Sbjct: 91 ttagattcacgcacaaactcg 111
