miRNEST 2.0, an integrative microRNA resource :: BLAST
>40334_rco-MIR156e:mirbase
Length = 95
Score = 79.8 bits (40), Expect = 3e-16
Identities = 75/84 (89%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 1 tgacagaagaaagagagcacaacccgccatt-ggccaaagagatcttcgccactgttggg 59
|||||||||| ||||||||||||||| |||| ||| |||||| |||| ||| |||||||
Sbjct: 6 tgacagaagagagagagcacaacccggcattaggctaaagag-tctttgcctttgttggg 64
Query: 60 agtgtgctctctcttcttctgtca 83
||||||||||||| ||||||||||
Sbjct: 65 agtgtgctctctcctcttctgtca 88
>41080_tcc-MIR156a:mirbase
Length = 124
Score = 63.9 bits (32), Expect = 2e-11
Identities = 72/84 (85%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 1 tgacagaagaaagagagcacaacccgccattggccaaagaga-tcttcgccactgttggg 59
|||||||||| ||||||||||||||| ||| || ||||| | |||| || |||||||
Sbjct: 21 tgacagaagagagagagcacaacccggcatcagctaaagaaagtctttgcttttgttggg 80
Query: 60 agtgtgctctctcttcttctgtca 83
|||||||| |||||||||||||||
Sbjct: 81 agtgtgctttctcttcttctgtca 104
>40430_gma-MIR156f:mirbase
Length = 106
Score = 61.9 bits (31), Expect = 6e-11
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 1 tgacagaagaaagagagcacaacccgccattggccaaagagatcttcgccactgttggga 60
|||||||||| ||||||||||||||| | ||| |||| |||| ||| ||||||||
Sbjct: 12 tgacagaagagagagagcacaacccgggaatggttaaaggagtctttgcctttgttggga 71
Query: 61 gtgtgctctctcttcttctgtca 83
||||||||||||||| |||||||
Sbjct: 72 gtgtgctctctcttcctctgtca 94
>40426_gma-MIR156b:mirbase
Length = 120
Score = 61.9 bits (31), Expect = 6e-11
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 1 tgacagaagaaagagagcacaacccgccattggccaaagagatcttcgccactgttggga 60
|||||||||| ||||||||||||||| | |||| |||| |||| ||| ||||||||
Sbjct: 21 tgacagaagagagagagcacaacccgggaatggctaaaggagtctttgcctttgttggga 80
Query: 61 gtgtgctctctcttcttctgtca 83
|||||| |||||||| |||||||
Sbjct: 81 gtgtgccctctcttcctctgtca 103
>41561_vvi-MIR156a:mirbase
Length = 104
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 55 ttgggagtgtgctctctcttcttctgtca 83
|||||||||||||||||||||||||||||
Sbjct: 64 ttgggagtgtgctctctcttcttctgtca 92
>40009_ath-MIR156h:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagaaagagagcacaacc 24
||||||||||||||||||||||||
Sbjct: 12 tgacagaagaaagagagcacaacc 35
>39797_aly-MIR156h:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagaaagagagcacaacc 24
||||||||||||||||||||||||
Sbjct: 8 tgacagaagaaagagagcacaacc 31
>40396_ahy-MIR156c:mirbase
Length = 139
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 53 tgttgggagtgtgctctctcttcttctgtca 83
||||||||||||||||||| ||||||||||
Sbjct: 75 tgttgggagtgtgctctctactcttctgtca 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tgacagaagaaagagagcacaacccg 26
|||||||||| |||||||||||||||
Sbjct: 22 tgacagaagagagagagcacaacccg 47
>40393_ahy-MIR156a:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 53 tgttgggagtgtgctctctcttcttctgtca 83
||||||||||||||||||| ||||||||||
Sbjct: 71 tgttgggagtgtgctctctactcttctgtca 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tgacagaagaaagagagcacaacccg 26
|||||||||| |||||||||||||||
Sbjct: 18 tgacagaagagagagagcacaacccg 43
>41914_osa-MIR156k:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tgacagaagaaagagagcacaacccg 26
|||||||||| |||||||||||||||
Sbjct: 11 tgacagaagagagagagcacaacccg 36
>42687_zma-MIR156j:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgacagaagaaagagagcacaaccc 25
|||||||||| ||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45
>42488_sbi-MIR156d:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgacagaagaaagagagcacaaccc 25
|||||||||| ||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45
>41204_aqc-MIR529:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgacagaagaaagagagcacaaccc 25
|||||||||| ||||||||||||||
Sbjct: 18 tgacagaagagagagagcacaaccc 42
>39728_smo-MIR156c:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagaaagagagcaca 21
|||||||||||||||||||||
Sbjct: 12 tgacagaagaaagagagcaca 32
>40427_gma-MIR156c:mirbase
Length = 185
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagaaagagagcacaacc 24
|||||||||| |||||||||||||
Sbjct: 147 tgacagaagatagagagcacaacc 170
>39416_pta-MIR156b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagaaagagagcacaacc 24
|||||||||| |||||||||||||
Sbjct: 3 tgacagaagatagagagcacaacc 26
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagaaagagagcacaac 23
|||||||||| ||||||||||||
Sbjct: 12 tgacagaagatagagagcacaac 34
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagaaagagagcacaac 23
|||||||||| ||||||||||||
Sbjct: 22 tgacagaagatagagagcacaac 44
>40335_rco-MIR156f:mirbase
Length = 97
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagaaagagagcacaac 23
|||||||||| ||||||||||||
Sbjct: 7 tgacagaagatagagagcacaac 29
>39755_smo-MIR1088:mirbase
Length = 96
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 2 gacagaagaaagagagcac 20
|||||||||||||||||||
Sbjct: 15 gacagaagaaagagagcac 33
>39754_smo-MIR1088:mirbase
Length = 96
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 2 gacagaagaaagagagcac 20
|||||||||||||||||||
Sbjct: 15 gacagaagaaagagagcac 33
