miRNEST 2.0, an integrative microRNA resource :: BLAST
>40311_bra-MIR159a:mirbase
Length = 185
Score = 333 bits (168), Expect = 3e-92
Identities = 174/176 (98%)
Strand = Plus / Plus
Query: 1 gggctccttatagttcaaacgagagttcagcagggtaaagaaaagctgctaagctatgaa 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 6 gggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaa 65
Query: 61 tcccataagccctaatccttatttataaaaaggatttggttatatggcttacatatctca 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 66 tcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatctca 125
Query: 121 ggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctc 181
>40261_bna-MIR159:mirbase
Length = 183
Score = 333 bits (168), Expect = 3e-92
Identities = 174/176 (98%)
Strand = Plus / Plus
Query: 1 gggctccttatagttcaaacgagagttcagcagggtaaagaaaagctgctaagctatgaa 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 4 gggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaa 63
Query: 61 tcccataagccctaatccttatttataaaaaggatttggttatatggcttacatatctca 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 64 tcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatctca 123
Query: 121 ggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctc 179
>39804_aly-MIR159a:mirbase
Length = 222
Score = 252 bits (127), Expect = 8e-68
Identities = 165/177 (93%), Gaps = 3/177 (1%)
Strand = Plus / Plus
Query: 3 gctccttatagttcaaacgagagttcagcagggtaaagaaaagctgctaagctatgaatc 62
||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 25 gctccttgaagttcaaacgagagttgagcagggtaaagaaaagctgctaagctatggatc 84
Query: 63 ccataagccctaatccttat---ttataaaaaggatttggttatatggcttacatatctc 119
|||||||||||||||||||| | |||||||||||||||||||||||| ||||||||
Sbjct: 85 ccataagccctaatccttataaagaaaaaaaaggatttggttatatggcttgcatatctc 144
Query: 120 aggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctc 176
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 145 aggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctc 201
>40016_ath-MIR159a:mirbase
Length = 184
Score = 232 bits (117), Expect = 7e-62
Identities = 162/176 (92%), Gaps = 2/176 (1%)
Strand = Plus / Plus
Query: 3 gctccttatagttcaaacgagagttcagcagggtaaagaaaagctgctaagctatgaatc 62
|||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| |||
Sbjct: 6 gctccttaaagttcaaacatgagttgagcagggtaaagaaaagctgctaagctatggatc 65
Query: 63 ccataagccctaatccttattta--taaaaaggatttggttatatggcttacatatctca 120
|||||||||||||||||| | | ||||||||||||||||||||| || |||||||||
Sbjct: 66 ccataagccctaatccttgtaaagtaaaaaaggatttggttatatggattgcatatctca 125
Query: 121 ggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctc 176
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 126 ggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctc 181
>39805_aly-MIR159b:mirbase
Length = 202
Score = 83.8 bits (42), Expect = 4e-17
Identities = 145/175 (82%), Gaps = 7/175 (4%)
Strand = Plus / Plus
Query: 3 gctccttatagttcaaacgagagttcagcagggtaaagaaaagctgctaagctatgaatc 62
||||||| ||||||| ||| ||| |||||||||||| ||||||||||||||||| |||
Sbjct: 19 gctccttgaagttcaatggagggtttagcagggtaaagtaaagctgctaagctatggatc 78
Query: 63 ccataagccctaatccttatttataaaaaggatttggttatatggcttacatatctcagg 122
|||||| || || | ||| | || |||||||| | ||||| || |||||||||||
Sbjct: 79 ccataaaccttat--caaattcaaaataaggattt---tttatggattccatatctcagg 133
Query: 123 agctttaacttgccc-tttaattgcttttactcttctttggattgaagggagctc 176
|||||| |||| ||| |||||| |||| ||||||||||||||||||||||||||
Sbjct: 134 agctttcacttacccctttaatggcttc-actcttctttggattgaagggagctc 187
>40017_ath-MIR159b:mirbase
Length = 196
Score = 67.9 bits (34), Expect = 2e-12
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 112 catatctcaggagctttaacttgccc-tttaattgcttttactcttctttggattgaagg 170
||||||||||||||||| |||| ||| |||||| |||| ||||||||||||||||||||
Sbjct: 122 catatctcaggagctttcacttacccctttaatggcttc-actcttctttggattgaagg 180
Query: 171 gagctc 176
||||||
Sbjct: 181 gagctc 186
Score = 65.9 bits (33), Expect = 1e-11
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 3 gctccttatagttcaaacgagagttcagcagggtaaagaaaagctgctaagctatgaatc 62
||||||| ||||||| ||| ||| |||||||| ||| ||||||||||||||||| |||
Sbjct: 7 gctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatggatc 66
Query: 63 ccataagcc 71
|||||||||
Sbjct: 67 ccataagcc 75
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 154 cttctttggattgaagggagctc 176
|||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctc 171
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 154 cttctttggattgaagggagctc 176
|||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctc 171
>40432_gma-MIR159a:mirbase
Length = 214
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 154 cttctttggattgaagggagctc 176
|||||||||||||||||||||||
Sbjct: 171 cttctttggattgaagggagctc 193
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 155 ttctttggattgaagggagctc 176
||||||||||||||||||||||
Sbjct: 149 ttctttggattgaagggagctc 170
>42695_zma-MIR159f:mirbase
Length = 215
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctc 212
>42690_zma-MIR159a:mirbase
Length = 246
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctc 225
>42635_tae-MIR159b:mirbase
Length = 255
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctc 248
>42494_sbi-MIR159:mirbase
Length = 226
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 202 tctttggattgaagggagctc 222
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 221 tctttggattgaagggagctc 241
>42455_sof-MIR159d:mirbase
Length = 265
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctc 244
>42453_sof-MIR159b:mirbase
Length = 266
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctc 245
>42452_sof-MIR159a:mirbase
Length = 265
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctc 244
>41918_osa-MIR159b:mirbase
Length = 188
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctc 176
>41917_osa-MIR159a:mirbase
Length = 272
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctc 260
>41916_osa-MIR159a:mirbase
Length = 272
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctc 260
>41868_far-MIR159:mirbase
Length = 200
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 167 tctttggattgaagggagctc 187
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 106 ggcttacatatctcaggagcttta 129
||||| ||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 106 ggcttacatatctcaggagcttta 129
||||| ||||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagcttta 136
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 106 ggcttacatatctcaggagcttta 129
||||| ||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
