miRNEST 2.0, an integrative microRNA resource :: BLAST
>40338_rco-MIR159:mirbase
Length = 180
Score = 61.9 bits (31), Expect = 1e-10
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatctgagtgggaatatcgagctgctggtctatggat 60
|||||||||||||||||||||||||||| |||| | || ||||||||| ||||||||
Sbjct: 6 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 65
Query: 61 ccc 63
|||
Sbjct: 66 ccc 68
Score = 48.1 bits (24), Expect = 2e-06
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 94 ttgtggcttgcatacgccaggagattcattatcctttttctgatccttttttggattgaa 153
|||||||||||||| |||||| ||||||| | | | | ||||||| |||||||||||
Sbjct: 106 ttgtggcttgcatatctcaggagcttcattaccttgtattagatccttgtttggattgaa 165
Query: 154 gggagctc 161
||||||||
Sbjct: 166 gggagctc 173
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 54.0 bits (27), Expect = 3e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatctgagtgggaatatcgagctgctggtctatggat 60
|||||||||||||||||||||||| ||| | |||| | || ||||||||| |||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 61 ccc 63
|||
Sbjct: 71 ccc 73
Score = 48.1 bits (24), Expect = 2e-06
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 94 ttgtggcttgcatacgccaggagattcattatcctttttctgatccttttttggattgaa 153
|||||||||||||| |||||| | |||||||| || ||||||| |||||||||||
Sbjct: 111 ttgtggcttgcatatctcaggagctgcattatccaagtttagatccttgtttggattgaa 170
Query: 154 gggagctc 161
||||||||
Sbjct: 171 gggagctc 178
>41528_sly-MIR159:mirbase
Length = 177
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 134 tgatccttttttggattgaagggagctc 161
||||| ||||||||||||||||||||||
Sbjct: 148 tgatcattttttggattgaagggagctc 175
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagg 24
||||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagagg 36
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 135 gatccttttttggattgaagggagctc 161
||||| |||||||||||||||||||||
Sbjct: 146 gatccctttttggattgaagggagctc 172
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagg 24
||||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagagg 36
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 135 gatccttttttggattgaagggagctc 161
||||| |||||||||||||||||||||
Sbjct: 146 gatccctttttggattgaagggagctc 172
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatct 28
||||||||||||||||||| ||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatct 31
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 136 atccttttttggattgaagggagctc 161
|||||| |||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctc 171
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatct 28
||||||||||||||||||| ||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatct 31
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 136 atccttttttggattgaagggagctc 161
|||||| |||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctc 171
>40432_gma-MIR159a:mirbase
Length = 214
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatct 28
||||||||||||||||||| ||||||||
Sbjct: 23 gagctccttgaagtccaattgaggatct 50
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 138 ccttttttggattgaagggagctc 161
|||| |||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctc 193
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 135 gatccttttttggattgaagggagctc 161
|||| ||||||||||||||||||||||
Sbjct: 150 gatctttttttggattgaagggagctc 176
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaataga 22
||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaataga 34
>40397_ahy-MIR159:mirbase
Length = 197
Score = 46.1 bits (23), Expect = 8e-06
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatctgagtgggaatatcgagctgctggtctatggat 60
|||||||||||||||||| ||||| ||| ||||| | || |||||||| ||||||||
Sbjct: 5 gagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatggat 64
Query: 61 ccc 63
|||
Sbjct: 65 ccc 67
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 135 gatccttttttggattgaagggagctc 161
||||||| |||||||||||||||||||
Sbjct: 149 gatccttatttggattgaagggagctc 175
>41218_csi-MIR159:mirbase
Length = 216
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 140 ttttttggattgaagggagctc 161
||||||||||||||||||||||
Sbjct: 183 ttttttggattgaagggagctc 204
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagg 24
|||||||||||||||||| |||||
Sbjct: 14 gagctccttgaagtccaaaagagg 37
