miRNEST 2.0, an integrative microRNA resource :: BLAST
>41541_sly-MIR171d:mirbase
Length = 112
Score = 127 bits (64), Expect = 1e-30
Identities = 83/88 (94%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1 agcgatgttggtgaggttcaatccgaagacgagtttacgttttgttttcgtaaagaacga 60
|||||||||||||||||||||||||||||||| |||| | || ||||||||||||||||
Sbjct: 9 agcgatgttggtgaggttcaatccgaagacgaatttatgctta-ttttcgtaaagaacga 67
Query: 61 tctcagattgagccgcgccaatatcact 88
||||||||||||||||||||||||||||
Sbjct: 68 tctcagattgagccgcgccaatatcact 95
>40365_rco-MIR171g:mirbase
Length = 89
Score = 95.6 bits (48), Expect = 5e-21
Identities = 79/88 (89%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1 agcgatgttggtgaggttcaatccgaagacgagtttacgttttgttttcgtaaagaacga 60
||||||||||||||||||||||||||||||| ||||| || | || |||||| ||||
Sbjct: 1 agcgatgttggtgaggttcaatccgaagacggatttacacattctgtt-gtaaaggacga 59
Query: 61 tctcagattgagccgcgccaatatcact 88
||||||||||||||||||||||||||||
Sbjct: 60 tctcagattgagccgcgccaatatcact 87
>41626_vvi-MIR171e:mirbase
Length = 103
Score = 83.8 bits (42), Expect = 2e-17
Identities = 77/88 (87%), Gaps = 3/88 (3%)
Strand = Plus / Plus
Query: 1 agcgatgttggtgaggttcaatccgaagacgagtttacgttttgttttcgtaaagaacga 60
||||||||||||||||||||||||||||||| |||||| | ||||||||||||
Sbjct: 9 agcgatgttggtgaggttcaatccgaagacggatttacgaagagc---cgtaaagaacga 65
Query: 61 tctcagattgagccgcgccaatatcact 88
|||| |||||||||||||||||||||||
Sbjct: 66 tctctgattgagccgcgccaatatcact 93
>41118_tcc-MIR171c:mirbase
Length = 123
Score = 81.8 bits (41), Expect = 7e-17
Identities = 79/91 (86%), Gaps = 3/91 (3%)
Strand = Plus / Plus
Query: 1 agcgatgttggtgaggttcaatccgaagacgagtttacgttttgttt---tcgtaaagaa 57
||||||||||||||||||||||||||||||| |||||| | || ||||||| |
Sbjct: 16 agcgatgttggtgaggttcaatccgaagacggatttacgcatgcattcagtcgtaaaata 75
Query: 58 cgatctcagattgagccgcgccaatatcact 88
|||||||||||||||||||||||||||||||
Sbjct: 76 cgatctcagattgagccgcgccaatatcact 106
>40699_mtr-MIR171e:mirbase
Length = 93
Score = 77.8 bits (39), Expect = 1e-15
Identities = 79/90 (87%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 1 agcgatgttggtgaggttcaatccgaagacgagtttac--gttttgttttcgtaaagaac 58
||||||||||||||||||||||||||||||| ||||| || | | || ||||| ||
Sbjct: 3 agcgatgttggtgaggttcaatccgaagacggatttacatgtatagagtt-gtaaaatac 61
Query: 59 gatctcagattgagccgcgccaatatcact 88
||||||||||||||||||||||||||||||
Sbjct: 62 gatctcagattgagccgcgccaatatcact 91
>41383_ptc-MIR171c:mirbase
Length = 104
Score = 65.9 bits (33), Expect = 4e-12
Identities = 77/91 (84%), Gaps = 3/91 (3%)
Strand = Plus / Plus
Query: 1 agcgatgttggtgaggttcaatccgaagacgagtttacgtttt---gttttcgtaaagaa 57
||||||||||||||||||||||||||||||| ||||| | || | ||||| |
Sbjct: 8 agcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaata 67
Query: 58 cgatctcagattgagccgcgccaatatcact 88
|||||||||||||||||||||||||||||||
Sbjct: 68 cgatctcagattgagccgcgccaatatcact 98
>41384_ptc-MIR171d:mirbase
Length = 100
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 58 cgatctcagattgagccgcgccaatatcact 88
|||||||||||||||||||||||||||||||
Sbjct: 64 cgatctcagattgagccgcgccaatatcact 94
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 agcgatgttggtgaggttcaatccgaagac 30
||||||||||||||||||||||||||||||
Sbjct: 8 agcgatgttggtgaggttcaatccgaagac 37
>41627_vvi-MIR171f:mirbase
Length = 103
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 59 gatctcagattgagccgcgccaatatcact 88
||||||||||||||||||||||||||||||
Sbjct: 64 gatctcagattgagccgcgccaatatcact 93
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 agcgatgttggtgaggttcaatccgaaga 29
||||||||||||||||||||||| |||||
Sbjct: 9 agcgatgttggtgaggttcaatctgaaga 37
>41117_tcc-MIR171b:mirbase
Length = 120
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 63 tcagattgagccgcgccaatatcact 88
||||||||||||||||||||||||||
Sbjct: 78 tcagattgagccgcgccaatatcact 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 gcgatgttggtgaggttcaatccgaaga 29
|||||||||||||||||||||| |||||
Sbjct: 19 gcgatgttggtgaggttcaatctgaaga 46
>39479_ppt-MIR171b:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 62 ctcagattgagccgcgccaatatcac 87
||||||||||||||||||||||||||
Sbjct: 61 ctcagattgagccgcgccaatatcac 86
>39478_ppt-MIR171a:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 63 tcagattgagccgcgccaatatcac 87
|||||||||||||||||||||||||
Sbjct: 61 tcagattgagccgcgccaatatcac 85
>42555_sbi-MIR171j:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatcact 88
|||||||||||||||||||||||
Sbjct: 84 gattgagccgcgccaatatcact 106
>39739_smo-MIR171d:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 61 tctcagattgagccgcgccaatatcac 87
||||| |||||||||||||||||||||
Sbjct: 65 tctcaaattgagccgcgccaatatcac 91
>41981_osa-MIR171a:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 agcgatgttggtgaggttcaatccga 26
|||||| |||||||||||||||||||
Sbjct: 7 agcgatattggtgaggttcaatccga 32
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatc 87
>41540_sly-MIR171c:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatcac 87
||||||||||||||||||||||
Sbjct: 79 gattgagccgcgccaatatcac 100
>41231_csi-MIR171a:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatcac 87
||||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatcac 89
>41211_ccl-MIR171:mirbase
Length = 321
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatcac 87
||||||||||||||||||||||
Sbjct: 123 gattgagccgcgccaatatcac 144
>42774_zma-MIR171n:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
>42761_zma-MIR171a:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>42552_sbi-MIR171g:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
>41764_bdi-MIR171a:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 51 gattgagccgcgccaatatc 70
>41391_ptc-MIR171k:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>41116_tcc-MIR171a:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>40322_bra-MIR171e:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>40291_bna-MIR171g:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>40290_bna-MIR171f:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>40060_ath-MIR171a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 89 gattgagccgcgccaatatc 108
>39849_aly-MIR171a:mirbase
Length = 198
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 131 gattgagccgcgccaatatc 150
>39736_smo-MIR171a:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 65 agattgagccgcgccaatatcact 88
||||||||||| ||||||||||||
Sbjct: 102 agattgagccgtgccaatatcact 125
