miRNEST 2.0, an integrative microRNA resource :: BLAST
>39821_aly-MIR166a:mirbase
Length = 167
Score = 135 bits (68), Expect = 9e-33
Identities = 118/134 (88%), Gaps = 3/134 (2%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgaggactctggctctatcaactcatgttggatcttcttcgat 60
|||||||||||||||||||||||||||||||| || | |||||||||||||| ||||||
Sbjct: 19 gggaatgttgtctggctcgaggactctggctcgctctattcatgttggatctttttcgat 78
Query: 61 c---taatcgaatcaaacctctatgtttgagatctgattagggttttagtgtcgtcggac 117
| ||||||||| |||||| | ||| |||||||| ||||||||||| ||||||||||
Sbjct: 79 ctaataatcgaattgaacctccagatttcagatctgactagggttttagcgtcgtcggac 138
Query: 118 caggcttcattccc 131
||||||||||||||
Sbjct: 139 caggcttcattccc 152
>40264_bna-MIR166a:mirbase
Length = 135
Score = 129 bits (65), Expect = 6e-31
Identities = 87/93 (93%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 40 tcatgttggatcttcttcgatctaatcgaatcaaacctctatgtttgagatctga-ttag 98
||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||
Sbjct: 38 tcatgttagatcttcttcgatttaatcgaatcaaacctccatgtttgagatctgatttag 97
Query: 99 ggttttagtgtcgtcggaccaggcttcattccc 131
| |||||| ||||||||||||||||||||||||
Sbjct: 98 gattttagggtcgtcggaccaggcttcattccc 130
>40032_ath-MIR166a:mirbase
Length = 170
Score = 103 bits (52), Expect = 3e-23
Identities = 114/134 (85%), Gaps = 3/134 (2%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgaggactctggctctatcaactcatgttggatcttcttcgat 60
|||| ||||||||||||||||||||||||||| || | ||||||||||||| ||||||
Sbjct: 20 gggactgttgtctggctcgaggactctggctcgctctattcatgttggatctctttcgat 79
Query: 61 ctaa---tcgaatcaaacctctatgtttgagatctgattagggttttagtgtcgtcggac 117
|||| |||||| ||||| | ||| |||| ||||||||||||||| ||| ||||||
Sbjct: 80 ctaacaatcgaattgaaccttcagatttcagatttgattagggttttagcgtcttcggac 139
Query: 118 caggcttcattccc 131
||||||||||||||
Sbjct: 140 caggcttcattccc 153
>40033_ath-MIR166b:mirbase
Length = 120
Score = 79.8 bits (40), Expect = 5e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 92 tgattagggttttagtgtcgtcggaccaggcttcattccc 131
||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 tgattagggttttagtgtcgtcggaccaggcttcattccc 115
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgaggactct 27
|||| ||||||||||||||||||||||
Sbjct: 6 gggactgttgtctggctcgaggactct 32
>41048_ghr-MIR166b:mirbase
Length = 154
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 104 tagtgtcgtcggaccaggcttcattccc 131
||||||||||||||||||||||||||||
Sbjct: 122 tagtgtcgtcggaccaggcttcattccc 149
>41324_ptc-MIR166c:mirbase
Length = 134
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgaggactct 27
|||||||||||||||||||||||||||
Sbjct: 12 gggaatgttgtctggctcgaggactct 38
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 103 ttagtgtcgtcggaccaggcttcattccc 131
|||| ||||||||||||||||||||||||
Sbjct: 96 ttagggtcgtcggaccaggcttcattccc 124
>40351_rco-MIR166e:mirbase
Length = 131
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgaggactct 27
|||||||||||||||||||||||||||
Sbjct: 5 gggaatgttgtctggctcgaggactct 31
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 105 agtgtcgtcggaccaggcttcattccc 131
|||||||||||||||||||||||||||
Sbjct: 99 agtgtcgtcggaccaggcttcattccc 125
>41587_vvi-MIR166e:mirbase
Length = 166
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 106 gtgtcgtcggaccaggcttcattccc 131
||||||||||||||||||||||||||
Sbjct: 129 gtgtcgtcggaccaggcttcattccc 154
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgaggac 24
||||||||||||||||||||||||
Sbjct: 11 gggaatgttgtctggctcgaggac 34
>41585_vvi-MIR166c:mirbase
Length = 160
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 106 gtgtcgtcggaccaggcttcattccc 131
||||||||||||||||||||||||||
Sbjct: 123 gtgtcgtcggaccaggcttcattccc 148
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgaggac 24
||||||||||||||||||||||||
Sbjct: 11 gggaatgttgtctggctcgaggac 34
>41171_aqc-MIR166e:mirbase
Length = 147
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 106 gtgtcgtcggaccaggcttcattccc 131
||||||||||||||||||||||||||
Sbjct: 115 gtgtcgtcggaccaggcttcattccc 140
>41532_sly-MIR166b:mirbase
Length = 201
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 103 ttagtgtcgtcggaccaggcttcattccc 131
||||||| |||||||||||||||||||||
Sbjct: 145 ttagtgttgtcggaccaggcttcattccc 173
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgagg 22
||||||||||||||||||||||
Sbjct: 38 gggaatgttgtctggctcgagg 59
>41332_ptc-MIR166k:mirbase
Length = 143
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgaggact 25
|||||||||||||||||||||||||
Sbjct: 12 gggaatgttgtctggctcgaggact 36
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 111 gtcggaccaggcttcattccc 131
|||||||||||||||||||||
Sbjct: 113 gtcggaccaggcttcattccc 133
>41331_ptc-MIR166j:mirbase
Length = 143
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgaggact 25
|||||||||||||||||||||||||
Sbjct: 12 gggaatgttgtctggctcgaggact 36
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 111 gtcggaccaggcttcattccc 131
|||||||||||||||||||||
Sbjct: 113 gtcggaccaggcttcattccc 133
>41279_ctr-MIR166:mirbase
Length = 414
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 103 ttagtgtcgtcggaccaggcttcattccc 131
|||||| ||||||||||||||||||||||
Sbjct: 182 ttagtgacgtcggaccaggcttcattccc 210
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgagg 22
||||||||||||||||||||||
Sbjct: 49 gggaatgttgtctggctcgagg 70
>41222_csi-MIR166a:mirbase
Length = 202
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 103 ttagtgtcgtcggaccaggcttcattccc 131
|||||| ||||||||||||||||||||||
Sbjct: 152 ttagtgacgtcggaccaggcttcattccc 180
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgagg 22
||||||||||||||||||||||
Sbjct: 19 gggaatgttgtctggctcgagg 40
>40348_rco-MIR166b:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 103 ttagtgtcgtcggaccaggcttcattccc 131
|||||| ||||||||||||||||||||||
Sbjct: 85 ttagtgacgtcggaccaggcttcattccc 113
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgagg 22
||||||||||||||||||||||
Sbjct: 5 gggaatgttgtctggctcgagg 26
>41226_csi-MIR166e:mirbase
Length = 177
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgaggac 24
||||||||||||||||||||||||
Sbjct: 21 gggaatgttgtctggctcgaggac 44
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 108 gtcgtcggaccaggcttcattccc 131
||||||||||||||||||||||||
Sbjct: 135 gtcgtcggaccaggcttcattccc 158
>40674_mtr-MIR166g:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgaggac 24
||||||||||||||||||||||||
Sbjct: 7 gggaatgttgtctggctcgaggac 30
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 tcggaccaggcttcattccc 131
||||||||||||||||||||
Sbjct: 82 tcggaccaggcttcattccc 101
>40439_gma-MIR166a:mirbase
Length = 146
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgaggac 24
||||||||||||||||||||||||
Sbjct: 22 gggaatgttgtctggctcgaggac 45
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 104 tagtgtcgtcggaccaggcttcattccc 131
|||||| |||||||||||||||||||||
Sbjct: 99 tagtgttgtcggaccaggcttcattccc 126
>39822_aly-MIR166b:mirbase
Length = 148
Score = 48.1 bits (24), Expect = 2e-06
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 92 tgattagggttttagtgtcgtcggaccaggcttcattccc 131
||||||||||||||| || ||||||||||||||||||||
Sbjct: 91 tgattagggttttagcatc-tcggaccaggcttcattccc 129
>39376_pab-MIR166a:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 108 gtcgtcggaccaggcttcattcc 130
|||||||||||||||||||||||
Sbjct: 51 gtcgtcggaccaggcttcattcc 73
>42721_zma-MIR166e:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgagg 22
||||||||||||||||||||||
Sbjct: 2 gggaatgttgtctggctcgagg 23
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 tcggaccaggcttcattccc 131
||||||||||||||||||||
Sbjct: 67 tcggaccaggcttcattccc 86
>42719_zma-MIR166c:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgagg 22
||||||||||||||||||||||
Sbjct: 2 gggaatgttgtctggctcgagg 23
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 tcggaccaggcttcattccc 131
||||||||||||||||||||
Sbjct: 72 tcggaccaggcttcattccc 91
>42511_sbi-MIR166d:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgagg 22
||||||||||||||||||||||
Sbjct: 2 gggaatgttgtctggctcgagg 23
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 tcggaccaggcttcattccc 131
||||||||||||||||||||
Sbjct: 67 tcggaccaggcttcattccc 86
>41940_osa-MIR166d:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgagg 22
||||||||||||||||||||||
Sbjct: 20 gggaatgttgtctggctcgagg 41
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 tcggaccaggcttcattccc 131
||||||||||||||||||||
Sbjct: 91 tcggaccaggcttcattccc 110
>41747_bdi-MIR166e:mirbase
Length = 151
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgagg 22
||||||||||||||||||||||
Sbjct: 34 gggaatgttgtctggctcgagg 55
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 tcggaccaggcttcattccc 131
||||||||||||||||||||
Sbjct: 99 tcggaccaggcttcattccc 118
>41322_ptc-MIR166a:mirbase
Length = 164
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgagg 22
||||||||||||||||||||||
Sbjct: 12 gggaatgttgtctggctcgagg 33
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 111 gtcggaccaggcttcattccc 131
|||||||||||||||||||||
Sbjct: 134 gtcggaccaggcttcattccc 154
>40036_ath-MIR166e:mirbase
Length = 143
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 110 cgtcggaccaggcttcattccc 131
||||||||||||||||||||||
Sbjct: 117 cgtcggaccaggcttcattccc 138
>39825_aly-MIR166e:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 110 cgtcggaccaggcttcattccc 131
||||||||||||||||||||||
Sbjct: 148 cgtcggaccaggcttcattccc 169
>39420_pta-MIR166a:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 110 cgtcggaccaggcttcattccc 131
||||||||||||||||||||||
Sbjct: 64 cgtcggaccaggcttcattccc 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcga 20
||||||||||||||||||||
Sbjct: 10 gggaatgttgtctggctcga 29
>42729_zma-MIR166m:mirbase
Length = 156
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 110 cgtcggaccaggcttcattcc 130
|||||||||||||||||||||
Sbjct: 115 cgtcggaccaggcttcattcc 135
>42513_sbi-MIR166f:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 110 cgtcggaccaggcttcattcc 130
|||||||||||||||||||||
Sbjct: 98 cgtcggaccaggcttcattcc 118
>41944_osa-MIR166h:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 110 cgtcggaccaggcttcattcc 130
|||||||||||||||||||||
Sbjct: 87 cgtcggaccaggcttcattcc 107
>41586_vvi-MIR166d:mirbase
Length = 160
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 103 ttagtgtcgtcggaccaggcttcattccc 131
|||||| | ||||||||||||||||||||
Sbjct: 120 ttagtgccctcggaccaggcttcattccc 148
>41338_ptc-MIR166q:mirbase
Length = 151
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 ggaatgttgtctggctcgagg 22
|||||||||||||||||||||
Sbjct: 12 ggaatgttgtctggctcgagg 32
>41333_ptc-MIR166l:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 107 tgtcgtcggaccaggcttcattccc 131
|||| ||||||||||||||||||||
Sbjct: 63 tgtcctcggaccaggcttcattccc 87
>41330_ptc-MIR166i:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 107 tgtcgtcggaccaggcttcattccc 131
|||| ||||||||||||||||||||
Sbjct: 69 tgtcctcggaccaggcttcattccc 93
>41025_pvu-MIR166a:mirbase
Length = 670
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 ggaatgttgtctggctcgagg 22
|||||||||||||||||||||
Sbjct: 125 ggaatgttgtctggctcgagg 145
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 tcggaccaggcttcattccc 131
||||||||||||||||||||
Sbjct: 228 tcggaccaggcttcattccc 247
>40440_gma-MIR166b:mirbase
Length = 167
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 ggaatgttgtctggctcgagg 22
|||||||||||||||||||||
Sbjct: 23 ggaatgttgtctggctcgagg 43
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 tcggaccaggcttcattccc 131
||||||||||||||||||||
Sbjct: 128 tcggaccaggcttcattccc 147
>40266_bna-MIR166c:mirbase
Length = 128
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 111 gtcggaccaggcttcattccc 131
|||||||||||||||||||||
Sbjct: 92 gtcggaccaggcttcattccc 112
>40265_bna-MIR166b:mirbase
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 111 gtcggaccaggcttcattccc 131
|||||||||||||||||||||
Sbjct: 90 gtcggaccaggcttcattccc 110
>40037_ath-MIR166f:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 111 gtcggaccaggcttcattccc 131
|||||||||||||||||||||
Sbjct: 77 gtcggaccaggcttcattccc 97
>39826_aly-MIR166f:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 111 gtcggaccaggcttcattccc 131
|||||||||||||||||||||
Sbjct: 77 gtcggaccaggcttcattccc 97
>39824_aly-MIR166d:mirbase
Length = 113
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 ggaatgttgtctggctcgagg 22
|||||||||||||||||||||
Sbjct: 9 ggaatgttgtctggctcgagg 29
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 tcggaccaggcttcattccc 131
||||||||||||||||||||
Sbjct: 87 tcggaccaggcttcattccc 106
>39823_aly-MIR166c:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 ggaatgttgtctggctcgagg 22
|||||||||||||||||||||
Sbjct: 9 ggaatgttgtctggctcgagg 29
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 tcggaccaggcttcattccc 131
||||||||||||||||||||
Sbjct: 95 tcggaccaggcttcattccc 114
>39735_smo-MIR166c:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 111 gtcggaccaggcttcattccc 131
|||||||||||||||||||||
Sbjct: 106 gtcggaccaggcttcattccc 126
>39421_pta-MIR166b:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 111 gtcggaccaggcttcattccc 131
|||||||||||||||||||||
Sbjct: 89 gtcggaccaggcttcattccc 109