miRNEST 2.0, an integrative microRNA resource :: BLAST
>42472_ssp-MIR396:mirbase
Length = 95
Score = 188 bits (95), Expect = 5e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcatctctaagaggagcagctcgaagcctcgaactctacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatctctaagaggagcagctcgaagcctcgaactctacc 60
Query: 61 tgcatgagcaggtgcagttcaataaagctgtggga 95
|||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcatgagcaggtgcagttcaataaagctgtggga 95
>42461_sof-MIR396:mirbase
Length = 134
Score = 188 bits (95), Expect = 5e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcatctctaagaggagcagctcgaagcctcgaactctacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatctctaagaggagcagctcgaagcctcgaactctacc 80
Query: 61 tgcatgagcaggtgcagttcaataaagctgtggga 95
|||||||||||||||||||||||||||||||||||
Sbjct: 81 tgcatgagcaggtgcagttcaataaagctgtggga 115
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 125 bits (63), Expect = 6e-30
Identities = 88/95 (92%), Gaps = 6/95 (6%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcatctctaagaggagcagctcgaagcctcgaactctacc 60
||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||
Sbjct: 21 ttccacagctttcttgaactgcatctctaagaggagcagcttgaa--ctc----tctacc 74
Query: 61 tgcatgagcaggtgcagttcaataaagctgtggga 95
|||||||||||||||||||||||||||||||||||
Sbjct: 75 tgcatgagcaggtgcagttcaataaagctgtggga 109
>42814_zma-MIR396h:mirbase
Length = 124
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 1 ttccacagctttcttgaactgcatctctaagaggagc 37
|||||||||||||||||||||||||||| ||||||||
Sbjct: 98 ttccacagctttcttgaactgcatctctcagaggagc 62
>42808_zma-MIR396b:mirbase
Length = 136
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcatctctaagaggagc 37
|||||||||||||||||||||||||||| ||||||||
Sbjct: 21 ttccacagctttcttgaactgcatctctcagaggagc 57
>42027_osa-MIR396b:mirbase
Length = 116
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcatct 26
||||||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgcatct 36
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 gtgcagttcaataaagctgtggga 95
||||||||||||||||||||||||
Sbjct: 83 gtgcagttcaataaagctgtggga 106
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcatct 26
||||||||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaactgcatct 58
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 gtgcagttcaataaagctgtggga 95
|||| |||||||||||||||||||
Sbjct: 96 gtgctgttcaataaagctgtggga 119
>42813_zma-MIR396g:mirbase
Length = 114
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 1 ttccacagctttcttgaactgcatc 25
|||||||||||||||||||||||||
Sbjct: 111 ttccacagctttcttgaactgcatc 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 74 gcagttcaataaagctgtggga 95
||||||||||||||||||||||
Sbjct: 23 gcagttcaataaagctgtggga 2
>41242_csi-MIR396b:mirbase
Length = 134
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcatc 25
|||||||||||||||||||||||||
Sbjct: 20 ttccacagctttcttgaactgcatc 44
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcatc 25
|||||||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaactgcatc 30
>40473_gma-MIR396a:mirbase
Length = 140
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcatc 25
|||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatc 45
>42807_zma-MIR396a:mirbase
Length = 137
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcat 24
||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 gcagttcaataaagctgtggga 95
||||||||||||||||||||||
Sbjct: 97 gcagttcaataaagctgtggga 118
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcat 24
||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 gcagttcaataaagctgtggga 95
||||||||||||||||||||||
Sbjct: 85 gcagttcaataaagctgtggga 106
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcat 24
||||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgcat 34
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcat 24
||||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcat 24
>40646_lja-MIR396:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcat 24
||||||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaactgcat 39
>42026_osa-MIR396a:mirbase
Length = 154
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 gcagttcaataaagctgtggga 95
||||||||||||||||||||||
Sbjct: 123 gcagttcaataaagctgtggga 144
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 70 aggtgcagttcaataaagctgtgg 93
||||||||||||| ||||||||||
Sbjct: 36 aggtgcagttcaagaaagctgtgg 13
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 70 aggtgcagttcaataaagctgtgg 93
||||||||||||| ||||||||||
Sbjct: 36 aggtgcagttcaagaaagctgtgg 13
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 tgcagttcaataaagctgtggga 95
|||||||||||||||||||||||
Sbjct: 109 tgcagttcaataaagctgtggga 131
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgc 22
||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgc 42
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
>40085_ath-MIR396a:mirbase
Length = 151
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
>39877_aly-MIR396a:mirbase
Length = 172
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 24 ttccacagctttcttgaactgca 46
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgc 22
||||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaactgc 54
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 gcagttcaataaagctgtggga 95
||||||||||||||||||||||
Sbjct: 99 gcagttcaataaagctgtggga 120
>41662_vvi-MIR396c:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactg 21
|||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactg 31
>41241_csi-MIR396a:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactg 21
|||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactg 41
>41138_tcc-MIR396a:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactg 21
|||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactg 41
>40477_gma-MIR396e:mirbase
Length = 114
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactg 21
|||||||||||||||||||||
Sbjct: 7 ttccacagctttcttgaactg 27
>42812_zma-MIR396f:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 2 ttccacagctttcttgaact 21
>42811_zma-MIR396e:mirbase
Length = 166
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 2 ttccacagctttcttgaact 21
>42584_sbi-MIR396c:mirbase
Length = 162
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42028_osa-MIR396c:mirbase
Length = 141
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41795_bdi-MIR396e:mirbase
Length = 201
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaact 51
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>41660_vvi-MIR396a:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41243_csi-MIR396c:mirbase
Length = 178
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 13 ttccacagctttcttgaact 32
>41212_ccl-MIR396:mirbase
Length = 277
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 143 ttccacagctttcttgaact 162
>41189_aqc-MIR396b:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41140_tcc-MIR396c:mirbase
Length = 152
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40726_mtr-MIR396a:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>40476_gma-MIR396d:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>40475_gma-MIR396c:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40474_gma-MIR396b:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40379_rco-MIR396:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>40296_bna-MIR396a:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>40086_ath-MIR396b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>39878_aly-MIR396b:mirbase
Length = 188
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaact 51
>39426_pta-MIR396:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 17 ttccacagctttcttgaact 36
>39379_pab-MIR396a:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaact 35
