miRNEST 2.0, an integrative microRNA resource :: BLAST
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 180 bits (91), Expect = 1e-46
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24 ctggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaata 83
Query: 61 catgaatcgatcgataaacctctgcatccag 91
|||||||||||||||||||||||||||||||
Sbjct: 84 catgaatcgatcgataaacctctgcatccag 114
>41090_tcc-MIR162:mirbase
Length = 131
Score = 165 bits (83), Expect = 7e-42
Identities = 89/91 (97%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaata 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 21 ctggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaataacacaaata 80
Query: 61 catgaatcgatcgataaacctctgcatccag 91
||||| |||||||||||||||||||||||||
Sbjct: 81 catgattcgatcgataaacctctgcatccag 111
>41220_csi-MIR162:mirbase
Length = 201
Score = 105 bits (53), Expect = 5e-24
Identities = 85/93 (91%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaa-taacacaaa- 58
||||||||||||||||||||||| ||| || ||||||||||||| || |||||||||
Sbjct: 89 ctggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataacacaaaa 148
Query: 59 tacatgaatcgatcgataaacctctgcatccag 91
|||||||||||||||||||||||||||||||||
Sbjct: 149 tacatgaatcgatcgataaacctctgcatccag 181
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 93.7 bits (47), Expect = 2e-20
Identities = 83/91 (91%), Gaps = 3/91 (3%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaata 60
||||||||||||||||||||||||||||||| ||| |||| ||||| || | |||| | |
Sbjct: 13 ctggaggcagcggttcatcgatctcttcctgggaa-tttggtgtga-aaaatcacaga-a 69
Query: 61 catgaatcgatcgataaacctctgcatccag 91
|||||||||||||||||||||||||||||||
Sbjct: 70 catgaatcgatcgataaacctctgcatccag 100
>40342_rco-MIR162:mirbase
Length = 101
Score = 81.8 bits (41), Expect = 8e-17
Identities = 82/93 (88%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcct-gagaattttgttgtgaga-ataacacaaa 58
|||||||||||||||||||||||||||||| || |||||||||||| | | || |||
Sbjct: 4 ctggaggcagcggttcatcgatctcttcctggaagattttgttgtgaaacaaaaataaaa 63
Query: 59 tacatgaatcgatcgataaacctctgcatccag 91
|||||||||||||||||||||||||||||||
Sbjct: 64 cgcatgaatcgatcgataaacctctgcatccag 96
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatctcttcctg 41
>40437_gma-MIR162:mirbase
Length = 102
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 61 catgaatcgatcgataaacctctgcatccag 91
|||||||||||||||||||||||||||||||
Sbjct: 63 catgaatcgatcgataaacctctgcatccag 93
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctga 32
||||| ||||||||||||||||||||||||||
Sbjct: 10 ctggatgcagcggttcatcgatctcttcctga 41
>40024_ath-MIR162a:mirbase
Length = 140
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||||||||||
Sbjct: 25 ctggaggcagcggttcatcgatctcttcctg 55
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 61 catgaatcgatcgataaacctctgcatccag 91
||||||| |||||||||||||||||||||||
Sbjct: 79 catgaatagatcgataaacctctgcatccag 109
>39813_aly-MIR162b:mirbase
Length = 184
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 61 catgaatcgatcgataaacctctgcatccag 91
|||||||||||||||||||||||||||||||
Sbjct: 103 catgaatcgatcgataaacctctgcatccag 133
>39812_aly-MIR162a:mirbase
Length = 228
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||||||||||
Sbjct: 68 ctggaggcagcggttcatcgatctcttcctg 98
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 61 catgaatcgatcgataaacctctgcatccag 91
||||||| |||||||||||||||||||||||
Sbjct: 126 catgaatagatcgataaacctctgcatccag 156
>42502_sbi-MIR162:mirbase
Length = 127
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 64 gaatcgatcgataaacctctgcatccag 91
||||||||||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 64 gaatcgatcgataaacctctgcatccag 91
||||||||||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>41578_vvi-MIR162:mirbase
Length = 103
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctga 32
||||| ||||||||||||||||||||||||||
Sbjct: 9 ctggatgcagcggttcatcgatctcttcctga 40
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctga 32
|||||||||||||||||||||||| |||||||
Sbjct: 11 ctggaggcagcggttcatcgatcttttcctga 42
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctga 32
|||||||||||||||||||||||| |||||||
Sbjct: 11 ctggaggcagcggttcatcgatcttttcctga 42
>40663_mtr-MIR162:mirbase
Length = 124
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 60 acatgaatcgatcgataaacctctgcatccag 91
|||||||||| |||||||||||||||||||||
Sbjct: 76 acatgaatcggtcgataaacctctgcatccag 107
>40025_ath-MIR162b:mirbase
Length = 111
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 64 gaatcgatcgataaacctctgcatccag 91
||||||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccag 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctgagaat 36
||||||||||||||||||||||| |||||| ||||
Sbjct: 12 ctggaggcagcggttcatcgatcaattcctgtgaat 47
>41736_bdi-MIR162:mirbase
Length = 133
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 64 gaatcgatcgataaacctctgcatcc 89
||||||||||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
>42708_zma-MIR162:mirbase
Length = 130
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 64 gaatcgatcgataaacctctgcatccag 91
|||||| |||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>41930_osa-MIR162b:mirbase
Length = 134
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 64 gaatcgatcgataaacctctgcatccag 91
|||||||||||||| |||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatccag 124
>41530_sly-MIR162:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 64 gaatcgatcgataaacctctgcatccag 91
|||||| |||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
