miRNEST 2.0, an integrative microRNA resource :: BLAST
>40299_bna-MIR399:mirbase
Length = 102
Score = 198 bits (100), Expect = 5e-52
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 1 cagggcaagatctctattggcagaaaaccattacttagatctttgcatctctttctgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cagggcaagatctctattggcagaaaaccattacttagatctttgcatctctttctgcat 61
Query: 61 tgatttgtagtgagttctctgccaaaggagatttgcccgg 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tgatttgtagtgagttctctgccaaaggagatttgcccgg 101
>39884_aly-MIR399a:mirbase
Length = 162
Score = 151 bits (76), Expect = 1e-37
Identities = 94/100 (94%)
Strand = Plus / Plus
Query: 1 cagggcaagatctctattggcagaaaaccattacttagatctttgcatctctttctgcat 60
||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 34 cagggtaagatctctattggcaggaaaccattacttagatctttgcatctctttatgcat 93
Query: 61 tgatttgtagtgagttctctgccaaaggagatttgcccgg 100
|| ||| ||||||||||||||||||||||||||||||||
Sbjct: 94 tgcttttaagtgagttctctgccaaaggagatttgcccgg 133
>39893_aly-MIR399j:mirbase
Length = 136
Score = 135 bits (68), Expect = 7e-33
Identities = 94/100 (94%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 1 cagggcaagatctctattggcagaaaaccattacttagatctttgcatctctttctgcat 60
||||||||||||||||||||||| |||||||||||| || |||||||||||||| |||||
Sbjct: 19 cagggcaagatctctattggcaggaaaccattactt-gacctttgcatctctttatgcat 77
Query: 61 tgatttgtagtgagttctctgccaaaggagatttgcccgg 100
|| ||||||||||||||| |||||||||||||||||||||
Sbjct: 78 tgctttgtagtgagttct-tgccaaaggagatttgcccgg 116
>39891_aly-MIR399h:mirbase
Length = 106
Score = 135 bits (68), Expect = 7e-33
Identities = 94/100 (94%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 1 cagggcaagatctctattggcagaaaaccattacttagatctttgcatctctttctgcat 60
||||||||||||||||||||||| |||||||||||| || |||||||||||||| |||||
Sbjct: 5 cagggcaagatctctattggcaggaaaccattactt-gacctttgcatctctttatgcat 63
Query: 61 tgatttgtagtgagttctctgccaaaggagatttgcccgg 100
|| ||||||||||||||| |||||||||||||||||||||
Sbjct: 64 tgctttgtagtgagttct-tgccaaaggagatttgcccgg 102
>40092_ath-MIR399a:mirbase
Length = 123
Score = 125 bits (63), Expect = 6e-30
Identities = 92/101 (91%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 cagggcaagatctctattggcagaaaaccattacttagatctttgcatctctttctgcat 60
||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 11 cagggtaagatctctattggcaggaaaccattacttagatctttgcatctctttatgcat 70
Query: 61 tgattt---gtagtgagttctctgccaaaggagatttgccc 98
|| ||| ||||||||| |||||||||||||||||||||
Sbjct: 71 tgcttttaattagtgagttatctgccaaaggagatttgccc 111
>40097_ath-MIR399f:mirbase
Length = 118
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 64 tttgtagtgagttctctgccaaaggagatttgcccgg 100
||||| ||||| |||||||||||||||||||||||||
Sbjct: 72 tttgtggtgagctctctgccaaaggagatttgcccgg 108
>39889_aly-MIR399f:mirbase
Length = 167
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 64 tttgtagtgagttctctgccaaaggagatttgccc 98
||||| ||||| |||||||||||||||||||||||
Sbjct: 96 tttgtggtgagctctctgccaaaggagatttgccc 130
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 1 cagggcaagatctctattggcagaaaaccattactt 36
|||||||||||| | ||||||||||| | |||||||
Sbjct: 35 cagggcaagatcaccattggcagaaatctattactt 70
>41672_vvi-MIR399e:mirbase
Length = 112
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 77 ctctgccaaaggagatttgcccgg 100
||||||||||||||||||||||||
Sbjct: 79 ctctgccaaaggagatttgcccgg 102
>41147_tcc-MIR399b:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 77 ctctgccaaaggagatttgcccgg 100
||||||||||||||||||||||||
Sbjct: 92 ctctgccaaaggagatttgcccgg 115
>40095_ath-MIR399d:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 ttctctgccaaaggagatttgccc 98
||||||||||||||||||||||||
Sbjct: 65 ttctctgccaaaggagatttgccc 88
>39887_aly-MIR399d:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 ttctctgccaaaggagatttgccc 98
||||||||||||||||||||||||
Sbjct: 79 ttctctgccaaaggagatttgccc 102
>42046_osa-MIR399f:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 76 tctctgccaaaggagatttgccc 98
|||||||||||||||||||||||
Sbjct: 83 tctctgccaaaggagatttgccc 105
>41246_csi-MIR399a:mirbase
Length = 155
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 tctgccaaaggagatttgcccgg 100
|||||||||||||||||||||||
Sbjct: 112 tctgccaaaggagatttgcccgg 134
>41149_tcc-MIR399d:mirbase
Length = 136
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 tctgccaaaggagatttgcccgg 100
|||||||||||||||||||||||
Sbjct: 94 tctgccaaaggagatttgcccgg 116
>42594_sbi-MIR399f:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 77 ctctgccaaaggagatttgccc 98
||||||||||||||||||||||
Sbjct: 78 ctctgccaaaggagatttgccc 99
>40384_rco-MIR399b:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 ctgccaaaggagatttgcccgg 100
||||||||||||||||||||||
Sbjct: 80 ctgccaaaggagatttgcccgg 101
>42047_osa-MIR399g:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tctgccaaaggagatttgccc 98
|||||||||||||||||||||
Sbjct: 87 tctgccaaaggagatttgccc 107
>41450_ptc-MIR399c:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 80 tgccaaaggagatttgcccgg 100
|||||||||||||||||||||
Sbjct: 97 tgccaaaggagatttgcccgg 117
>41449_ptc-MIR399b:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 80 tgccaaaggagatttgcccgg 100
|||||||||||||||||||||
Sbjct: 97 tgccaaaggagatttgcccgg 117
>40736_mtr-MIR399f:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tctgccaaaggagatttgccc 98
|||||||||||||||||||||
Sbjct: 77 tctgccaaaggagatttgccc 97
>40735_mtr-MIR399e:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tctgccaaaggagatttgccc 98
|||||||||||||||||||||
Sbjct: 93 tctgccaaaggagatttgccc 113
>40731_mtr-MIR399a:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tctgccaaaggagatttgccc 98
|||||||||||||||||||||
Sbjct: 93 tctgccaaaggagatttgccc 113
>40387_rco-MIR399e:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tctgccaaaggagatttgccc 98
|||||||||||||||||||||
Sbjct: 81 tctgccaaaggagatttgccc 101
>40385_rco-MIR399c:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 80 tgccaaaggagatttgcccgg 100
|||||||||||||||||||||
Sbjct: 71 tgccaaaggagatttgcccgg 91
>40096_ath-MIR399e:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 77 ctctgccaaaggagatttgcc 97
|||||||||||||||||||||
Sbjct: 76 ctctgccaaaggagatttgcc 96
>39888_aly-MIR399e:mirbase
Length = 191
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 77 ctctgccaaaggagatttgcc 97
|||||||||||||||||||||
Sbjct: 115 ctctgccaaaggagatttgcc 135
>42593_sbi-MIR399e:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 79 ctgccaaaggagatttgccc 98
||||||||||||||||||||
Sbjct: 86 ctgccaaaggagatttgccc 105
>42045_osa-MIR399e:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 79 ctgccaaaggagatttgccc 98
||||||||||||||||||||
Sbjct: 87 ctgccaaaggagatttgccc 106
>41674_vvi-MIR399g:mirbase
Length = 113
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 79 ctgccaaaggagatttgccc 98
||||||||||||||||||||
Sbjct: 82 ctgccaaaggagatttgccc 101
>41457_ptc-MIR399j:mirbase
Length = 112
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 ctctgccaaaggagatttgcccgg 100
||||||||||||||||||| ||||
Sbjct: 79 ctctgccaaaggagatttgtccgg 102
>41448_ptc-MIR399a:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 79 ctgccaaaggagatttgccc 98
||||||||||||||||||||
Sbjct: 90 ctgccaaaggagatttgccc 109
>41153_tcc-MIR399h:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 79 ctgccaaaggagatttgccc 98
||||||||||||||||||||
Sbjct: 76 ctgccaaaggagatttgccc 95
>40737_mtr-MIR399g:mirbase
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 79 ctgccaaaggagatttgccc 98
||||||||||||||||||||
Sbjct: 78 ctgccaaaggagatttgccc 97
>39892_aly-MIR399i:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 79 ctgccaaaggagatttgccc 98
||||||||||||||||||||
Sbjct: 91 ctgccaaaggagatttgccc 110
>39890_aly-MIR399g:mirbase
Length = 157
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 79 ctgccaaaggagatttgccc 98
||||||||||||||||||||
Sbjct: 110 ctgccaaaggagatttgccc 129
