miRNEST 2.0, an integrative microRNA resource :: BLAST
>39804_aly-MIR159a:mirbase
Length = 222
Score = 272 bits (137), Expect = 8e-74
Identities = 171/181 (94%), Gaps = 1/181 (0%)
Strand = Plus / Plus
Query: 1 agagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgg 60
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 22 agagctccttgaagttcaaacgagagttgagcagggtaaagaaaagctgctaagctatgg 81
Query: 61 atcccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgcatat 119
|||||||||||||||| ||||| | | | ||||| | ||||||||||||||||||||||
Sbjct: 82 atcccataagccctaatccttataaagaaaaaaaaggatttggttatatggcttgcatat 141
Query: 120 ctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 ctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctc 201
Query: 180 t 180
|
Sbjct: 202 t 202
>40311_bra-MIR159a:mirbase
Length = 185
Score = 252 bits (127), Expect = 8e-68
Identities = 168/178 (94%), Gaps = 4/178 (2%)
Strand = Plus / Plus
Query: 4 gctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatggatc 63
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 8 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 67
Query: 64 ccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgcatatctc 122
||||||||||||| ||||| | ||| |||||||||| ||||||||||||| ||||||||
Sbjct: 68 ccataagccctaatccttatatata--aaaaggattt-ggttatatggcttacatatctc 124
Query: 123 aggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctct 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 125 aggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctct 182
>40261_bna-MIR159:mirbase
Length = 183
Score = 252 bits (127), Expect = 8e-68
Identities = 168/178 (94%), Gaps = 4/178 (2%)
Strand = Plus / Plus
Query: 4 gctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatggatc 63
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 6 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 65
Query: 64 ccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgcatatctc 122
||||||||||||| ||||| | ||| |||||||||| ||||||||||||| ||||||||
Sbjct: 66 ccataagccctaatccttatatata--aaaaggattt-ggttatatggcttacatatctc 122
Query: 123 aggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctct 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 123 aggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctct 180
>40016_ath-MIR159a:mirbase
Length = 184
Score = 248 bits (125), Expect = 1e-66
Identities = 169/181 (93%), Gaps = 2/181 (1%)
Strand = Plus / Plus
Query: 1 agagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgg 60
||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 3 agagctccttaaagttcaaacatgagttgagcagggtaaagaaaagctgctaagctatgg 62
Query: 61 atcccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgcatat 119
|||||||||||||||| |||| | | ||||||||||| |||||||||| ||||||||
Sbjct: 63 atcccataagccctaatccttgtaaagtaaaaaaggattt-ggttatatggattgcatat 121
Query: 120 ctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctc 181
Query: 180 t 180
|
Sbjct: 182 t 182
>39805_aly-MIR159b:mirbase
Length = 202
Score = 115 bits (58), Expect = 1e-26
Identities = 153/181 (84%), Gaps = 9/181 (4%)
Strand = Plus / Plus
Query: 1 agagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgg 60
|||||||||| |||||||| ||| |||||||||||||||| ||||||||||||||||||
Sbjct: 16 agagctccttgaagttcaatggagggtttagcagggtaaagtaaagctgctaagctatgg 75
Query: 61 atcccataagccctaaccttaaacatagaaaaaggattttggttatatggcttgcatatc 120
||||||||| || || | ||| | || ||||||| || ||||| || ||||||
Sbjct: 76 atcccataaacctta---tcaaattcaaaataaggatt----ttttatggattccatatc 128
Query: 121 tcaggagctttaactt-gccctttaatggcttttactcttctttggattgaagggagctc 179
||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||||
Sbjct: 129 tcaggagctttcacttacccctttaatggc-ttcactcttctttggattgaagggagctc 187
Query: 180 t 180
|
Sbjct: 188 t 188
>40017_ath-MIR159b:mirbase
Length = 196
Score = 95.6 bits (48), Expect = 1e-20
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 1 agagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgg 60
|||||||||| |||||||| ||| |||||||||||| ||| ||||||||||||||||||
Sbjct: 4 agagctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatgg 63
Query: 61 atcccataagcc 72
||||||||||||
Sbjct: 64 atcccataagcc 75
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 109 ggcttgcatatctcaggagcttta 132
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 44 aagctgctaagctatggatcc 64
|||||||||||||||||||||
Sbjct: 54 aagctgctaagctatggatcc 74
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctct 180
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 109 ggcttgcatatctcaggagcttta 132
||||||||||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagcttta 136
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctct 180
||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 109 ggcttgcatatctcaggagcttta 132
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 44 aagctgctaagctatggatcc 64
|||||||||||||||||||||
Sbjct: 54 aagctgctaagctatggatcc 74
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctct 180
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 157 cttctttggattgaagggagctct 180
||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctct 172
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 157 cttctttggattgaagggagctct 180
||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctct 172
>40432_gma-MIR159a:mirbase
Length = 214
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 157 cttctttggattgaagggagctct 180
||||||||||||||||||||||||
Sbjct: 171 cttctttggattgaagggagctct 194
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 158 ttctttggattgaagggagctct 180
|||||||||||||||||||||||
Sbjct: 149 ttctttggattgaagggagctct 171
>40338_rco-MIR159:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 108 tggcttgcatatctcaggagctt 130
|||||||||||||||||||||||
Sbjct: 109 tggcttgcatatctcaggagctt 131
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctct 180
||||||||||||||||||||
Sbjct: 155 tttggattgaagggagctct 174
>42695_zma-MIR159f:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctct 213
>42690_zma-MIR159a:mirbase
Length = 246
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226
>42635_tae-MIR159b:mirbase
Length = 255
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctct 249
>42494_sbi-MIR159:mirbase
Length = 226
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 202 tctttggattgaagggagctct 223
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 221 tctttggattgaagggagctct 242
>42455_sof-MIR159d:mirbase
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>42453_sof-MIR159b:mirbase
Length = 266
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctct 246
>42452_sof-MIR159a:mirbase
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>41918_osa-MIR159b:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctct 177
>41917_osa-MIR159a:mirbase
Length = 272
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>41916_osa-MIR159a:mirbase
Length = 272
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>41868_far-MIR159:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 167 tctttggattgaagggagctct 188
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 108 tggcttgcatatctcaggagct 129
||||||||||||||||||||||
Sbjct: 114 tggcttgcatatctcaggagct 135
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctct 180
||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctct 179
>40397_ahy-MIR159:mirbase
Length = 197
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 45 agctgctaagctatggatccca 66
||||||||||||||||||||||
Sbjct: 47 agctgctaagctatggatccca 68
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctct 180
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
