miRNEST 2.0, an integrative microRNA resource :: BLAST
>42454_sof-MIR159c:mirbase
Length = 238
Score = 343 bits (173), Expect = 3e-95
Identities = 173/173 (100%)
Strand = Plus / Plus
Query: 1 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 105
Query: 61 tgcctctctggtgcagcaatgactaatgctcacctgcacttgcatgggtgtgcatgaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 tgcctctctggtgcagcaatgactaatgctcacctgcacttgcatgggtgtgcatgaccc 165
Query: 121 gggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctcc 173
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 gggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctcc 218
>42495_sbi-MIR159b:mirbase
Length = 253
Score = 335 bits (169), Expect = 7e-93
Identities = 172/173 (99%)
Strand = Plus / Plus
Query: 1 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 120
Query: 61 tgcctctctggtgcagcaatgactaatgctcacctgcacttgcatgggtgtgcatgaccc 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 121 tgcctctctggtgcagcaatgactgatgctcacctgcacttgcatgggtgtgcatgaccc 180
Query: 121 gggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctcc 173
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctcc 233
>42692_zma-MIR159c:mirbase
Length = 217
Score = 270 bits (136), Expect = 3e-73
Identities = 166/175 (94%), Gaps = 2/175 (1%)
Strand = Plus / Plus
Query: 1 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 82
Query: 61 tgcctctctggtgcagcaatgactaatgctcac--ctgcacttgcatgggtgtgcatgac 118
| ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||
Sbjct: 83 tacctctctggtgcagcaatggccgctgctcacctctgcacttgcatgggtgtgcatgac 142
Query: 119 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctcc 173
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 143 ccgggagatgagcccgccatcatctttccctcgtgcttggattgaagggagctcc 197
>42693_zma-MIR159d:mirbase
Length = 217
Score = 262 bits (132), Expect = 8e-71
Identities = 165/175 (94%), Gaps = 2/175 (1%)
Strand = Plus / Plus
Query: 1 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 23 gagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccggttcatgga 82
Query: 61 tgcctctctggtgcagcaatgactaa--tgctcacctgcacttgcatgggtgtgcatgac 118
| ||||||||||||||||||| | | ||||||||||||||||||||||||||||||||
Sbjct: 83 tacctctctggtgcagcaatggccgagatgctcacctgcacttgcatgggtgtgcatgac 142
Query: 119 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctcc 173
|||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 ccgggagacgaaccgaccatcatctttccctcgtgcttggattgaagggagctcc 197
>41730_bdi-MIR159:mirbase
Length = 234
Score = 155 bits (78), Expect = 1e-38
Identities = 153/174 (87%), Gaps = 3/174 (1%)
Strand = Plus / Plus
Query: 1 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 30 gagctcccttcgatccaatccaggaggggaagtggtcggatgcagctgccggttcatgga 89
Query: 61 tgcctctctggtgca-gcaatg-actaatgctcacctgcacttgcatgggtgtgcatgac 118
| ||| ||||||||| ||| || |||| | | |||| ||||| ||| ||||||||
Sbjct: 90 tacctgtctggtgcatgcagtgtggtaatagcctgc-gcacctgcatcggtttgcatgac 148
Query: 119 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 172
|||||||||||||| ||| | ||||||||||||||||||||||||||||||||
Sbjct: 149 ccgggagatgaacctgccagcgtctttccctcgtgcttggattgaagggagctc 202
>41922_osa-MIR159f:mirbase
Length = 188
Score = 131 bits (66), Expect = 2e-31
Identities = 146/172 (84%), Gaps = 8/172 (4%)
Strand = Plus / Plus
Query: 1 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60
|||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 13 gagctcccttcgatccaatccaggagaggaagtggtaggatgcagctgccggttcatgga 72
Query: 61 tgcctctctggtgcagcaatgactaatgctcacctgcacttgcatgggtgtgcatgaccc 120
| ||||| |||| ||| | | ||| ||||||||||||||| ||||||||||
Sbjct: 73 tacctctgcagtgc----atgtcgtaggct----tgcacttgcatgggtttgcatgaccc 124
Query: 121 gggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 172
|||||||||||||||||| |||| | || |||||||||||||||||||||
Sbjct: 125 gggagatgaacccaccattgtcttcctcttatgcttggattgaagggagctc 176
>41919_osa-MIR159c:mirbase
Length = 197
Score = 99.6 bits (50), Expect = 7e-22
Identities = 144/174 (82%), Gaps = 1/174 (0%)
Strand = Plus / Plus
Query: 1 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60
||||||| ||||||||||| |||||| ||||||||| || ||||||||||| ||||||||
Sbjct: 13 gagctcctttcgatccaattcaggagaggaagtggtaggatgcagctgccgattcatgga 72
Query: 61 tgcctctctggtgca-gcaatgactaatgctcacctgcacttgcatgggtgtgcatgacc 119
| ||||| ||||| | | | | || ||||||||||||||||| |||||||||
Sbjct: 73 tacctctggagtgcatggcagcaatgctgtaggcctgcacttgcatgggtttgcatgacc 132
Query: 120 cgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctcc 173
||||||||||||||||||| |||| | || || |||||||||||||||||||
Sbjct: 133 cgggagatgaacccaccattgtcttcctctattgattggattgaagggagctcc 186
>41920_osa-MIR159d:mirbase
Length = 189
Score = 85.7 bits (43), Expect = 1e-17
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 1 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60
||||||| ||||||||||| |||||| ||||||||| || ||||||||||||||||||||
Sbjct: 13 gagctcctttcgatccaattcaggagaggaagtggtgggatgcagctgccggttcatgga 72
Query: 61 tgcctct 67
| |||||
Sbjct: 73 tacctct 79
Score = 65.9 bits (33), Expect = 9e-12
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 93 cctgcacttgcatgggtgtgcatgacccgggagatgaacccaccatcatctttccctcgt 152
||||||||||||||||| ||||||||| |||||||||||| |||| | || | || |
Sbjct: 98 cctgcacttgcatgggtttgcatgacctgggagatgaacctgccattgtgttcctctatt 157
Query: 153 gcttggattgaagggagctcc 173
| |||||||||||||||||||
Sbjct: 158 gattggattgaagggagctcc 178
>41921_osa-MIR159e:mirbase
Length = 191
Score = 79.8 bits (40), Expect = 6e-16
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 1 gagctccctt-cgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgg 59
|||||||||| ||||||||| |||||| ||||||||| || |||||||||||||||||||
Sbjct: 13 gagctccctttcgatccaattcaggagaggaagtggtaggatgcagctgccggttcatgg 72
Query: 60 atgcctct 67
|| |||||
Sbjct: 73 atacctct 80
>41302_ptc-MIR159d:mirbase
Length = 194
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 cttggattgaagggagctcc 173
||||||||||||||||||||
Sbjct: 165 cttggattgaagggagctcc 184
>39730_smo-MIR159:mirbase
Length = 279
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 cttggattgaagggagctcc 173
||||||||||||||||||||
Sbjct: 249 cttggattgaagggagctcc 268
>39424_pta-MIR319:mirbase
Length = 206
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 154 cttggattgaagggagctcc 173
||||||||||||||||||||
Sbjct: 27 cttggattgaagggagctcc 8
>39419_pta-MIR159c:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 cttggattgaagggagctcc 173
||||||||||||||||||||
Sbjct: 49 cttggattgaagggagctcc 68
>39417_pta-MIR159a:mirbase
Length = 210
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 cttggattgaagggagctcc 173
||||||||||||||||||||
Sbjct: 184 cttggattgaagggagctcc 203
