miRNEST 2.0, an integrative microRNA resource :: BLAST
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 89.7 bits (45), Expect = 6e-19
Identities = 154/183 (84%), Gaps = 13/183 (7%)
Strand = Plus / Plus
Query: 1 gagagcttccttca-cccactcatgga--ggagaactggggttgaattagctgccgcctc 57
|||||||||||||| |||||||||||| |||||| ||||||||||||||||||| |||
Sbjct: 12 gagagcttccttcagcccactcatggataggagaaa-ggggttgaattagctgccgactc 70
Query: 58 attcatccaaccactcagtagaaa----ggaataggttttgt---gctactgtgattgag 110
|||||| ||| ||| ||||||||| ||||| | | || | ||||||||||||| |
Sbjct: 71 attcattcaagcac-cagtagaaaaaggggaatggatattcttttgctactgtgattgtg 129
Query: 111 tgaatgatgcgggagatagttttctat-tcctctctttccttgcttggactgaagggagc 169
|||||||||||||||||| |||| || ||||| |||| |||||||||||||||||||
Sbjct: 130 tgaatgatgcgggagataattttacatcccctctttttctgtgcttggactgaagggagc 189
Query: 170 tcc 172
|||
Sbjct: 190 tcc 192
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 81.8 bits (41), Expect = 2e-16
Identities = 72/80 (90%), Gaps = 3/80 (3%)
Strand = Plus / Plus
Query: 95 tgctactgtgattgagtgaatgatgcgggagatagttttctattcctctc--tttccttg 152
|||||||||||||| ||||||||||||||||||| ||||| | ||||||| |||| ||
Sbjct: 116 tgctactgtgattgtgtgaatgatgcgggagataattttcca-tcctctccttttctgtg 174
Query: 153 cttggactgaagggagctcc 172
||||||||||||||||||||
Sbjct: 175 cttggactgaagggagctcc 194
>40369_rco-MIR319c:mirbase
Length = 188
Score = 54.0 bits (27), Expect = 4e-08
Identities = 68/79 (86%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 95 tgctactgtgattgagtgaatgatgcgggagatagttttctattcctctctt-tccttgc 153
||||| ||||| || ||||||||||||||||||| |||| || | |||||| || |||
Sbjct: 104 tgctattgtgaatgtgtgaatgatgcgggagataaatttc-atacttctcttctctgtgc 162
Query: 154 ttggactgaagggagctcc 172
|||||||||||||||||||
Sbjct: 163 ttggactgaagggagctcc 181
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 39 ttgaattagctgccgcctcattcatccaa 67
||||||||||||||| |||||||||||||
Sbjct: 49 ttgaattagctgccgactcattcatccaa 77
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 151 tgcttggactgaagggagctcc 172
||||||||||||||||||||||
Sbjct: 148 tgcttggactgaagggagctcc 169
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 46.1 bits (23), Expect = 9e-06
Identities = 67/79 (84%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 95 tgctactgtgattgagtgaatgatgcgggagatagttttctattcctctctt-tccttgc 153
||||| ||||| || ||||||||||||||||||| |||| || | | |||| || |||
Sbjct: 109 tgctattgtgaatgtgtgaatgatgcgggagataaatttc-atccttttcttctctgtgc 167
Query: 154 ttggactgaagggagctcc 172
|||||||||||||||||||
Sbjct: 168 ttggactgaagggagctcc 186
>40703_mtr-MIR319:mirbase
Length = 207
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 150 ttgcttggactgaagggagctcc 172
|||||||||||||||||||||||
Sbjct: 165 ttgcttggactgaagggagctcc 187
>42642_tae-MIR319:mirbase
Length = 211
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 151 tgcttggactgaagggagctcc 172
||||||||||||||||||||||
Sbjct: 181 tgcttggactgaagggagctcc 202
>41770_bdi-MIR319:mirbase
Length = 280
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 151 tgcttggactgaagggagctcc 172
||||||||||||||||||||||
Sbjct: 223 tgcttggactgaagggagctcc 244
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 151 tgcttggactgaagggagctcc 172
||||||||||||||||||||||
Sbjct: 159 tgcttggactgaagggagctcc 180
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 97 ctactgtgattgagtgaatgatgcgggag 125
||||||||| || ||||||||||||||||
Sbjct: 105 ctactgtgaatgtgtgaatgatgcgggag 133
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 151 tgcttggactgaagggagctcc 172
||||||||||||||||||||||
Sbjct: 162 tgcttggactgaagggagctcc 183
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 42 aattagctgccgcctcattcatccaa 67
|||||||||||| |||||||||||||
Sbjct: 52 aattagctgccgactcattcatccaa 77
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 107 tgagtgaatgatgcgggaga 126
||||||||||||||||||||
Sbjct: 114 tgagtgaatgatgcgggaga 133
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 153 cttggactgaagggagctcc 172
||||||||||||||||||||
Sbjct: 159 cttggactgaagggagctcc 178
>41282_ctr-MIR319:mirbase
Length = 186
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 151 tgcttggactgaagggagctcc 172
||||||||||||||||||||||
Sbjct: 154 tgcttggactgaagggagctcc 175
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 107 tgagtgaatgatgcgggaga 126
||||||||||||||||||||
Sbjct: 111 tgagtgaatgatgcgggaga 130
>40465_gma-MIR319b:mirbase
Length = 208
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 42 aattagctgccgcctcattcatccaa 67
|||||||||||| |||||||||||||
Sbjct: 63 aattagctgccgactcattcatccaa 88
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 107 tgagtgaatgatgcgggaga 126
||||||||||||||||||||
Sbjct: 124 tgagtgaatgatgcgggaga 143
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 153 cttggactgaagggagctcc 172
||||||||||||||||||||
Sbjct: 169 cttggactgaagggagctcc 188
>40464_gma-MIR319a:mirbase
Length = 207
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 42 aattagctgccgcctcattcatccaa 67
|||||||||||| |||||||||||||
Sbjct: 62 aattagctgccgactcattcatccaa 87
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 107 tgagtgaatgatgcgggaga 126
||||||||||||||||||||
Sbjct: 123 tgagtgaatgatgcgggaga 142
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 153 cttggactgaagggagctcc 172
||||||||||||||||||||
Sbjct: 168 cttggactgaagggagctcc 187
>40367_rco-MIR319a:mirbase
Length = 211
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 42 aattagctgccgcctcattcatccaa 67
|||||||||||| |||||||||||||
Sbjct: 46 aattagctgccgactcattcatccaa 71
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 107 tgagtgaatgatgcgggaga 126
||||||||||||||||||||
Sbjct: 140 tgagtgaatgatgcgggaga 159
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 153 cttggactgaagggagctcc 172
||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctcc 204
>40070_ath-MIR319b:mirbase
Length = 172
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 151 tgcttggactgaagggagctcc 172
||||||||||||||||||||||
Sbjct: 149 tgcttggactgaagggagctcc 170
>39859_aly-MIR319b:mirbase
Length = 246
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 151 tgcttggactgaagggagctcc 172
||||||||||||||||||||||
Sbjct: 188 tgcttggactgaagggagctcc 209
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 gcttggactgaagggagctcc 172
|||||||||||||||||||||
Sbjct: 408 gcttggactgaagggagctcc 428
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 153 cttggactgaagggagctcc 172
||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctcc 181
>41544_sly-MIR319:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 36 gggttgaattagctgccgcctcattcatccaa 67
||||| |||| ||||||| |||||||||||||
Sbjct: 33 gggttcaatttgctgccgactcattcatccaa 64
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 153 cttggactgaagggagctcc 172
||||||||||||||||||||
Sbjct: 149 cttggactgaagggagctcc 168
>41185_aqc-MIR319:mirbase
Length = 177
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 153 cttggactgaagggagctcc 172
||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctcc 173
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 107 tgagtgaatgatgcgggaga 126
||||||||||||||||||||
Sbjct: 110 tgagtgaatgatgcgggaga 129
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 153 cttggactgaagggagctcc 172
||||||||||||||||||||
Sbjct: 155 cttggactgaagggagctcc 174
>40368_rco-MIR319b:mirbase
Length = 179
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 153 cttggactgaagggagctcc 172
||||||||||||||||||||
Sbjct: 153 cttggactgaagggagctcc 172
>40071_ath-MIR319c:mirbase
Length = 199
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 110 gtgaatgatgcgggagatagtttt 133
||||||||||||||||||| ||||
Sbjct: 127 gtgaatgatgcgggagatattttt 150
>39740_smo-MIR319:mirbase
Length = 215
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 153 cttggactgaagggagctcc 172
||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctcc 204
>39484_ppt-MIR319e:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 153 cttggactgaagggagctcc 172
||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctcc 166
>39483_ppt-MIR319d:mirbase
Length = 170
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 153 cttggactgaagggagctcc 172
||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctcc 164
>39482_ppt-MIR319c:mirbase
Length = 189
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 153 cttggactgaagggagctcc 172
||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctcc 173
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 153 cttggactgaagggagctcc 172
||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcc 159
>39480_ppt-MIR319a:mirbase
Length = 169
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 153 cttggactgaagggagctcc 172
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
