miRNEST 2.0, an integrative microRNA resource :: BLAST
>40360_rco-MIR171b:mirbase
Length = 91
Score = 67.9 bits (34), Expect = 1e-12
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatcggagaactttgctctttgtttagagagctatgttgtttga 60
|||||||||||||||||||| |||| | ||||||| | | ||||| | ||||||||||
Sbjct: 7 gatattggtgcggttcaatcagagatcattgctctatatatagagcttt-tgttgtttga 65
Query: 61 ttgagccgtgccaatatc 78
||||||||||||||||||
Sbjct: 66 ttgagccgtgccaatatc 83
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 51 tgttgtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||||||
Sbjct: 60 tgttgtttgattgagccgtgccaatatc 87
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 54.0 bits (27), Expect = 1e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 44 agagctatgttgtttgattgagccgtgccaatatc 78
|||||| | ||||||||||||||||||||||||||
Sbjct: 57 agagctctattgtttgattgagccgtgccaatatc 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatc 20
||||||||||||||||||||
Sbjct: 14 gatattggtgcggttcaatc 33
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 52 gttgtttgattgagccgtgccaatatc 78
|||||||||||||||||||||||||||
Sbjct: 27 gttgtttgattgagccgtgccaatatc 1
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 52 gttgtttgattgagccgtgccaatatc 78
|||||||||||||||||||||||||||
Sbjct: 74 gttgtttgattgagccgtgccaatatc 100
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||||
Sbjct: 67 ttgtttgattgagccgtgccaatatc 92
>40318_bra-MIR171a:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||||
Sbjct: 57 ttgtttgattgagccgtgccaatatc 82
>40305_bol-MIR171a:mirbase
Length = 96
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||||
Sbjct: 63 ttgtttgattgagccgtgccaatatc 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatc 20
||||||||||||||||||||
Sbjct: 10 gatattggtgcggttcaatc 29
>40289_bna-MIR171e:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||||
Sbjct: 62 ttgtttgattgagccgtgccaatatc 87
>40288_bna-MIR171d:mirbase
Length = 96
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||||
Sbjct: 63 ttgtttgattgagccgtgccaatatc 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatc 20
||||||||||||||||||||
Sbjct: 10 gatattggtgcggttcaatc 29
>39851_aly-MIR171c:mirbase
Length = 111
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||||
Sbjct: 69 ttgtttgattgagccgtgccaatatc 94
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 54 tgtttgattgagccgtgccaatatc 78
|||||||||||||||||||||||||
Sbjct: 118 tgtttgattgagccgtgccaatatc 142
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatcggaga 25
|||||||||||||||||||||||||
Sbjct: 21 gatattggtgcggttcaatcggaga 45
Score = 48.1 bits (24), Expect = 9e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 51 tgttgtttgattgagccgtgccaatatc 78
|||| |||||||||||||||||||||||
Sbjct: 70 tgttatttgattgagccgtgccaatatc 97
>41538_sly-MIR171a:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 55 gtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||
Sbjct: 84 gtttgattgagccgtgccaatatc 107
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 55 gtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 9e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 51 tgttgtttgattgagccgtgccaatatc 78
|||| |||||||||||||||||||||||
Sbjct: 60 tgttatttgattgagccgtgccaatatc 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatc 20
||||||||||||||||||||
Sbjct: 6 gatattggtgcggttcaatc 25
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 55 gtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>40457_gma-MIR171c:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 9e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 51 tgttgtttgattgagccgtgccaatatc 78
|||| |||||||||||||||||||||||
Sbjct: 65 tgttatttgattgagccgtgccaatatc 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatc 20
||||||||||||||||||||
Sbjct: 13 gatattggtgcggttcaatc 32
>40061_ath-MIR171b:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 9e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 51 tgttgtttgattgagccgtgccaatatc 78
||||||| ||||||||||||||||||||
Sbjct: 68 tgttgttcgattgagccgtgccaatatc 95
>39850_aly-MIR171b:mirbase
Length = 137
Score = 48.1 bits (24), Expect = 9e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 51 tgttgtttgattgagccgtgccaatatc 78
||||||| ||||||||||||||||||||
Sbjct: 79 tgttgttcgattgagccgtgccaatatc 106
>42762_zma-MIR171b:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatc 82
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatc 82
>41983_osa-MIR171c:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatatc 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatc 20
||||||||||||||||||||
Sbjct: 11 gatattggtgcggttcaatc 30
>41982_osa-MIR171b:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatc 90
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatc 84
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatc 90
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaat 19
|||||||||||||||||||
Sbjct: 12 gatattggtgcggttcaat 30
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 98 tttgattgagccgtgccaatatc 120
>41216_crt-MIR171:mirbase
Length = 201
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 159 tttgattgagccgtgccaatatc 181
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaat 19
|||||||||||||||||||
Sbjct: 104 gatattggtgcggttcaat 122
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 82 tttgattgagccgtgccaatatc 104
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 75 tttgattgagccgtgccaatatc 97
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 119 tttgattgagccgtgccaatatc 141
>40364_rco-MIR171f:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 84 tttgattgagccgtgccaatatc 106
>40362_rco-MIR171d:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 97 tttgattgagccgtgccaatatc 119
>40359_rco-MIR171a:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatc 84
>40062_ath-MIR171c:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatc 107
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatc 20
||||||||||||||||||||
Sbjct: 29 gatattggtgcggttcaatc 48
>42769_zma-MIR171i:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 ttgattgagccgtgccaatatc 78
||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatc 85
>42766_zma-MIR171f:mirbase
Length = 155
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 ttgattgagccgtgccaatatc 78
||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatc 135
>41182_aqc-MIR171f:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 45 gagctatgttgtttgattgagccgtgccaatatc 78
||||| |||| ||| |||||||||||||||||||
Sbjct: 49 gagctttgttatttaattgagccgtgccaatatc 82
>41179_aqc-MIR171c:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 45 gagctatgttgtttgattgagccgtgccaatatc 78
||||| |||| ||| |||||||||||||||||||
Sbjct: 34 gagctttgttatttaattgagccgtgccaatatc 1
>40697_mtr-MIR171c:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatat 99
>40321_bra-MIR171d:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||| ||||||||||||||||||||
Sbjct: 65 ttgttcgattgagccgtgccaatatc 90
>40320_bra-MIR171c:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||| ||||||||||||||||||||
Sbjct: 59 ttgttcgattgagccgtgccaatatc 84
>40319_bra-MIR171b:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||| ||||||||||||||||||||
Sbjct: 66 ttgttcgattgagccgtgccaatatc 91
>40287_bna-MIR171c:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||| ||||||||||||||||||||
Sbjct: 59 ttgttcgattgagccgtgccaatatc 84
>40286_bna-MIR171b:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||| ||||||||||||||||||||
Sbjct: 65 ttgttcgattgagccgtgccaatatc 90
>40285_bna-MIR171a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||| ||||||||||||||||||||
Sbjct: 66 ttgttcgattgagccgtgccaatatc 91
>42770_zma-MIR171j:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatc 110
>42765_zma-MIR171e:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>42764_zma-MIR171d:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 82 tgattgagccgtgccaatatc 102
>42640_tae-MIR171a:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatatc 109
>42554_sbi-MIR171i:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88
>42549_sbi-MIR171d:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 114 tgattgagccgtgccaatatc 134
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatatc 113
>41986_osa-MIR171f:mirbase
Length = 127
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatatc 117
>41985_osa-MIR171e:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatatc 109
>41984_osa-MIR171d:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 105 tgattgagccgtgccaatatc 125
>41890_hvu-MIR171:mirbase
Length = 173
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 112 tgattgagccgtgccaatatc 132
>41874_far-MIR171:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatc 110
>41765_bdi-MIR171b:mirbase
Length = 164
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 114 tgattgagccgtgccaatatc 134
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatc 89
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatc 91
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatc 91
