miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40705_mtr-MIR390:mirbase
          Length = 100

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 66 ttgcgctatccatcctgagtttc 88
          |||||||||||||||||||||||
Sbjct: 74 ttgcgctatccatcctgagtttc 96




>40468_gma-MIR390a:mirbase
          Length = 105

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 66 ttgcgctatccatcctgagtttc 88
          |||||||||||||||||||||||
Sbjct: 65 ttgcgctatccatcctgagtttc 87



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 1  aagctcaggagggatagcaccatgga 26
          |||||||||||||||||| |||||||
Sbjct: 11 aagctcaggagggatagcgccatgga 36




>40467_gma-MIR390a:mirbase
          Length = 105

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 66 ttgcgctatccatcctgagtttc 88
          |||||||||||||||||||||||
Sbjct: 65 ttgcgctatccatcctgagtttc 87



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 1  aagctcaggagggatagcaccatgga 26
          |||||||||||||||||| |||||||
Sbjct: 11 aagctcaggagggatagcgccatgga 36




>41053_ghr-MIR390c:mirbase
          Length = 114

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 1  aagctcaggagggatagcaccatgga 26
          |||||||||||||||||| |||||||
Sbjct: 11 aagctcaggagggatagcgccatgga 36



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 68  gcgctatccatcctgagtttc 88
           |||||||||||||||||||||
Sbjct: 87  gcgctatccatcctgagtttc 107




>41052_ghr-MIR390b:mirbase
          Length = 132

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 1  aagctcaggagggatagcaccatgga 26
          |||||||||||||||||| |||||||
Sbjct: 18 aagctcaggagggatagcgccatgga 43



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 68  gcgctatccatcctgagtttc 88
           |||||||||||||||||||||
Sbjct: 94  gcgctatccatcctgagtttc 114




>41051_ghr-MIR390a:mirbase
          Length = 124

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 1  aagctcaggagggatagcaccatgga 26
          |||||||||||||||||| |||||||
Sbjct: 15 aagctcaggagggatagcgccatgga 40



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 68  gcgctatccatcctgagtttc 88
           |||||||||||||||||||||
Sbjct: 91  gcgctatccatcctgagtttc 111




>40372_rco-MIR390b:mirbase
          Length = 122

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 1  aagctcaggagggatagcaccatgga 26
          |||||||||||||||||| |||||||
Sbjct: 6  aagctcaggagggatagcgccatgga 31



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 68  gcgctatccatcctgagtttc 88
           |||||||||||||||||||||
Sbjct: 96  gcgctatccatcctgagtttc 116




>41414_ptc-MIR390b:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 68 gcgctatccatcctgagtttc 88
          |||||||||||||||||||||
Sbjct: 79 gcgctatccatcctgagtttc 99




>41237_csi-MIR390:mirbase
          Length = 154

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 1  aagctcaggagggatagcaccatgg 25
          |||||||||||||||||| ||||||
Sbjct: 21 aagctcaggagggatagcgccatgg 45



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 68  gcgctatccatcctgagtttc 88
           |||||||||||||||||||||
Sbjct: 98  gcgctatccatcctgagtttc 118




>41130_tcc-MIR390a:mirbase
          Length = 129

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 68  gcgctatccatcctgagtttc 88
           |||||||||||||||||||||
Sbjct: 88  gcgctatccatcctgagtttc 108




>40469_gma-MIR390b:mirbase
          Length = 103

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcacc 21
          |||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcacc 31




>40371_rco-MIR390a:mirbase
          Length = 108

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 68  gcgctatccatcctgagtttc 88
           |||||||||||||||||||||
Sbjct: 82  gcgctatccatcctgagtttc 102




>40073_ath-MIR390b:mirbase
          Length = 120

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 1  aagctcaggagggatagcaccatgg 25
          |||||||||||||||||| ||||||
Sbjct: 15 aagctcaggagggatagcgccatgg 39




>40072_ath-MIR390a:mirbase
          Length = 107

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 68 gcgctatccatcctgagtttc 88
          |||||||||||||||||||||
Sbjct: 69 gcgctatccatcctgagtttc 89



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  aagctcaggagggatagcaccatg 24
          |||||||||||||||||| |||||
Sbjct: 18 aagctcaggagggatagcgccatg 41




>39862_aly-MIR390a:mirbase
          Length = 129

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 68  gcgctatccatcctgagtttc 88
           |||||||||||||||||||||
Sbjct: 80  gcgctatccatcctgagtttc 100



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  aagctcaggagggatagcaccatg 24
          |||||||||||||||||| |||||
Sbjct: 29 aagctcaggagggatagcgccatg 52




>41640_vvi-MIR390:mirbase
          Length = 140

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  aagctcaggagggatagcaccatg 24
          |||||||||||||||||| |||||
Sbjct: 11 aagctcaggagggatagcgccatg 34




>41416_ptc-MIR390d:mirbase
          Length = 106

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 68 gcgctatccatcctgagttt 87
          ||||||||||||||||||||
Sbjct: 79 gcgctatccatcctgagttt 98




>41415_ptc-MIR390c:mirbase
          Length = 123

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  aagctcaggagggatagcaccatg 24
          |||||||||||||||||| |||||
Sbjct: 11 aagctcaggagggatagcgccatg 34




>41413_ptc-MIR390a:mirbase
          Length = 119

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  aagctcaggagggatagcaccatg 24
          |||||||||||||||||| |||||
Sbjct: 11 aagctcaggagggatagcgccatg 34




>40294_bna-MIR390c:mirbase
          Length = 128

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  aagctcaggagggatagcaccatg 24
          |||||||||||||||||| |||||
Sbjct: 23 aagctcaggagggatagcgccatg 46




>40292_bna-MIR390a:mirbase
          Length = 144

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  aagctcaggagggatagcaccatg 24
          |||||||||||||||||| |||||
Sbjct: 33 aagctcaggagggatagcgccatg 56




>39863_aly-MIR390b:mirbase
          Length = 127

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  aagctcaggagggatagcaccatg 24
          |||||||||||||||||| |||||
Sbjct: 19 aagctcaggagggatagcgccatg 42