miRNEST 2.0, an integrative microRNA resource :: BLAST
>40299_bna-MIR399:mirbase
Length = 102
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 gggcaagatctctattggcagaaaaccattacttagatctttgcatctctttctgcattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gggcaagatctctattggcagaaaaccattacttagatctttgcatctctttctgcattg 63
Query: 61 atttgtagtgagttctctgccaaaggagatttgccc 96
||||||||||||||||||||||||||||||||||||
Sbjct: 64 atttgtagtgagttctctgccaaaggagatttgccc 99
>39884_aly-MIR399a:mirbase
Length = 162
Score = 143 bits (72), Expect = 3e-35
Identities = 87/92 (94%)
Strand = Plus / Plus
Query: 5 aagatctctattggcagaaaaccattacttagatctttgcatctctttctgcattgattt 64
||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 40 aagatctctattggcaggaaaccattacttagatctttgcatctctttatgcattgcttt 99
Query: 65 gtagtgagttctctgccaaaggagatttgccc 96
||||||||||||||||||||||||||||||
Sbjct: 100 taagtgagttctctgccaaaggagatttgccc 131
>39893_aly-MIR399j:mirbase
Length = 136
Score = 127 bits (64), Expect = 2e-30
Identities = 90/96 (93%), Gaps = 2/96 (2%)
Strand = Plus / Plus
Query: 1 gggcaagatctctattggcagaaaaccattacttagatctttgcatctctttctgcattg 60
||||||||||||||||||||| |||||||||||| || |||||||||||||| |||||||
Sbjct: 21 gggcaagatctctattggcaggaaaccattactt-gacctttgcatctctttatgcattg 79
Query: 61 atttgtagtgagttctctgccaaaggagatttgccc 96
||||||||||||||| |||||||||||||||||||
Sbjct: 80 ctttgtagtgagttct-tgccaaaggagatttgccc 114
>39891_aly-MIR399h:mirbase
Length = 106
Score = 127 bits (64), Expect = 2e-30
Identities = 90/96 (93%), Gaps = 2/96 (2%)
Strand = Plus / Plus
Query: 1 gggcaagatctctattggcagaaaaccattacttagatctttgcatctctttctgcattg 60
||||||||||||||||||||| |||||||||||| || |||||||||||||| |||||||
Sbjct: 7 gggcaagatctctattggcaggaaaccattactt-gacctttgcatctctttatgcattg 65
Query: 61 atttgtagtgagttctctgccaaaggagatttgccc 96
||||||||||||||| |||||||||||||||||||
Sbjct: 66 ctttgtagtgagttct-tgccaaaggagatttgccc 100
>40092_ath-MIR399a:mirbase
Length = 123
Score = 121 bits (61), Expect = 1e-28
Identities = 87/95 (91%), Gaps = 3/95 (3%)
Strand = Plus / Plus
Query: 5 aagatctctattggcagaaaaccattacttagatctttgcatctctttctgcattgattt 64
||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 17 aagatctctattggcaggaaaccattacttagatctttgcatctctttatgcattgcttt 76
Query: 65 ---gtagtgagttctctgccaaaggagatttgccc 96
||||||||| |||||||||||||||||||||
Sbjct: 77 taattagtgagttatctgccaaaggagatttgccc 111
>40097_ath-MIR399f:mirbase
Length = 118
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 62 tttgtagtgagttctctgccaaaggagatttgccc 96
||||| ||||| |||||||||||||||||||||||
Sbjct: 72 tttgtggtgagctctctgccaaaggagatttgccc 106
>39889_aly-MIR399f:mirbase
Length = 167
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 62 tttgtagtgagttctctgccaaaggagatttgccc 96
||||| ||||| |||||||||||||||||||||||
Sbjct: 96 tttgtggtgagctctctgccaaaggagatttgccc 130
>40095_ath-MIR399d:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 73 ttctctgccaaaggagatttgccc 96
||||||||||||||||||||||||
Sbjct: 65 ttctctgccaaaggagatttgccc 88
>39887_aly-MIR399d:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 73 ttctctgccaaaggagatttgccc 96
||||||||||||||||||||||||
Sbjct: 79 ttctctgccaaaggagatttgccc 102
>42046_osa-MIR399f:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 74 tctctgccaaaggagatttgccc 96
|||||||||||||||||||||||
Sbjct: 83 tctctgccaaaggagatttgccc 105
>42594_sbi-MIR399f:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 ctctgccaaaggagatttgccc 96
||||||||||||||||||||||
Sbjct: 78 ctctgccaaaggagatttgccc 99
>41672_vvi-MIR399e:mirbase
Length = 112
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 ctctgccaaaggagatttgccc 96
||||||||||||||||||||||
Sbjct: 79 ctctgccaaaggagatttgccc 100
>41147_tcc-MIR399b:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 ctctgccaaaggagatttgccc 96
||||||||||||||||||||||
Sbjct: 92 ctctgccaaaggagatttgccc 113
>42047_osa-MIR399g:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tctgccaaaggagatttgccc 96
|||||||||||||||||||||
Sbjct: 87 tctgccaaaggagatttgccc 107
>41246_csi-MIR399a:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tctgccaaaggagatttgccc 96
|||||||||||||||||||||
Sbjct: 112 tctgccaaaggagatttgccc 132
>41149_tcc-MIR399d:mirbase
Length = 136
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tctgccaaaggagatttgccc 96
|||||||||||||||||||||
Sbjct: 94 tctgccaaaggagatttgccc 114
>40736_mtr-MIR399f:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tctgccaaaggagatttgccc 96
|||||||||||||||||||||
Sbjct: 77 tctgccaaaggagatttgccc 97
>40735_mtr-MIR399e:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tctgccaaaggagatttgccc 96
|||||||||||||||||||||
Sbjct: 93 tctgccaaaggagatttgccc 113
>40731_mtr-MIR399a:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tctgccaaaggagatttgccc 96
|||||||||||||||||||||
Sbjct: 93 tctgccaaaggagatttgccc 113
>40387_rco-MIR399e:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tctgccaaaggagatttgccc 96
|||||||||||||||||||||
Sbjct: 81 tctgccaaaggagatttgccc 101
>40096_ath-MIR399e:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 75 ctctgccaaaggagatttgcc 95
|||||||||||||||||||||
Sbjct: 76 ctctgccaaaggagatttgcc 96
>39888_aly-MIR399e:mirbase
Length = 191
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 75 ctctgccaaaggagatttgcc 95
|||||||||||||||||||||
Sbjct: 115 ctctgccaaaggagatttgcc 135
>42593_sbi-MIR399e:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 ctgccaaaggagatttgccc 96
||||||||||||||||||||
Sbjct: 86 ctgccaaaggagatttgccc 105
>42045_osa-MIR399e:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 ctgccaaaggagatttgccc 96
||||||||||||||||||||
Sbjct: 87 ctgccaaaggagatttgccc 106
>41674_vvi-MIR399g:mirbase
Length = 113
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 ctgccaaaggagatttgccc 96
||||||||||||||||||||
Sbjct: 82 ctgccaaaggagatttgccc 101
>41448_ptc-MIR399a:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 ctgccaaaggagatttgccc 96
||||||||||||||||||||
Sbjct: 90 ctgccaaaggagatttgccc 109
>41153_tcc-MIR399h:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 ctgccaaaggagatttgccc 96
||||||||||||||||||||
Sbjct: 76 ctgccaaaggagatttgccc 95
>40737_mtr-MIR399g:mirbase
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 ctgccaaaggagatttgccc 96
||||||||||||||||||||
Sbjct: 78 ctgccaaaggagatttgccc 97
>40384_rco-MIR399b:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 ctgccaaaggagatttgccc 96
||||||||||||||||||||
Sbjct: 80 ctgccaaaggagatttgccc 99
>39892_aly-MIR399i:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 ctgccaaaggagatttgccc 96
||||||||||||||||||||
Sbjct: 91 ctgccaaaggagatttgccc 110
>39890_aly-MIR399g:mirbase
Length = 157
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 ctgccaaaggagatttgccc 96
||||||||||||||||||||
Sbjct: 110 ctgccaaaggagatttgccc 129
