miRNEST 2.0, an integrative microRNA resource :: BLAST
>41053_ghr-MIR390c:mirbase
Length = 114
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatggatgatccatctttcaagctttcatgcatgtatgtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 agctcaggagggatagcgccatggatgatccatctttcaagctttcatgcatgtatgtta 71
Query: 61 tttgatcctcatatagcgctatccatcctgagtt 94
||||||||||||||||||||||||||||||||||
Sbjct: 72 tttgatcctcatatagcgctatccatcctgagtt 105
>41052_ghr-MIR390b:mirbase
Length = 132
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatggatgatccatctttcaagctttcatgcatgtatgtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 agctcaggagggatagcgccatggatgatccatctttcaagctttcatgcatgtatgtta 78
Query: 61 tttgatcctcatatagcgctatccatcctgagtt 94
||||||||||||||||||||||||||||||||||
Sbjct: 79 tttgatcctcatatagcgctatccatcctgagtt 112
>41051_ghr-MIR390a:mirbase
Length = 124
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatggatgatccatctttcaagctttcatgcatgtatgtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 agctcaggagggatagcgccatggatgatccatctttcaagctttcatgcatgtatgtta 75
Query: 61 tttgatcctcatatagcgctatccatcctgagtt 94
||||||||||||||||||||||||||||||||||
Sbjct: 76 tttgatcctcatatagcgctatccatcctgagtt 109
>40468_gma-MIR390a:mirbase
Length = 105
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatggatgatc 30
||||||||||||||||||||||||||||||
Sbjct: 12 agctcaggagggatagcgccatggatgatc 41
>40467_gma-MIR390a:mirbase
Length = 105
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatggatgatc 30
||||||||||||||||||||||||||||||
Sbjct: 12 agctcaggagggatagcgccatggatgatc 41
>40372_rco-MIR390b:mirbase
Length = 122
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatggatg 27
|||||||||||||||||||||||||||
Sbjct: 7 agctcaggagggatagcgccatggatg 33
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 72 tatagcgctatccatcctgagtt 94
|||||||||||||||||||||||
Sbjct: 92 tatagcgctatccatcctgagtt 114
>41130_tcc-MIR390a:mirbase
Length = 129
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatggatgatc 30
|||||||||||||||||||||| |||||||
Sbjct: 22 agctcaggagggatagcgccattgatgatc 51
Score = 48.1 bits (24), Expect = 1e-06
Identities = 31/32 (96%), Gaps = 1/32 (3%)
Strand = Plus / Plus
Query: 63 tgatcctcatatagcgctatccatcctgagtt 94
|||||||||| |||||||||||||||||||||
Sbjct: 76 tgatcctcat-tagcgctatccatcctgagtt 106
>41237_csi-MIR390:mirbase
Length = 154
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatgg 24
||||||||||||||||||||||||
Sbjct: 22 agctcaggagggatagcgccatgg 45
>40073_ath-MIR390b:mirbase
Length = 120
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatgg 24
||||||||||||||||||||||||
Sbjct: 16 agctcaggagggatagcgccatgg 39
>41640_vvi-MIR390:mirbase
Length = 140
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatg 23
|||||||||||||||||||||||
Sbjct: 12 agctcaggagggatagcgccatg 34
>41415_ptc-MIR390c:mirbase
Length = 123
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatg 23
|||||||||||||||||||||||
Sbjct: 12 agctcaggagggatagcgccatg 34
>41413_ptc-MIR390a:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatg 23
|||||||||||||||||||||||
Sbjct: 12 agctcaggagggatagcgccatg 34
>40294_bna-MIR390c:mirbase
Length = 128
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatg 23
|||||||||||||||||||||||
Sbjct: 24 agctcaggagggatagcgccatg 46
>40292_bna-MIR390a:mirbase
Length = 144
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatg 23
|||||||||||||||||||||||
Sbjct: 34 agctcaggagggatagcgccatg 56
>40072_ath-MIR390a:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatg 23
|||||||||||||||||||||||
Sbjct: 19 agctcaggagggatagcgccatg 41
>39863_aly-MIR390b:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatg 23
|||||||||||||||||||||||
Sbjct: 20 agctcaggagggatagcgccatg 42
>39862_aly-MIR390a:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccatg 23
|||||||||||||||||||||||
Sbjct: 30 agctcaggagggatagcgccatg 52
>41131_tcc-MIR390b:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccat 22
||||||||||||||||||||||
Sbjct: 22 agctcaggagggatagcgccat 43
>40705_mtr-MIR390:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccat 22
||||||||||||||||||||||
Sbjct: 7 agctcaggagggatagcgccat 28
>40293_bna-MIR390b:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccat 22
||||||||||||||||||||||
Sbjct: 19 agctcaggagggatagcgccat 40
>39485_ppt-MIR390a:mirbase
Length = 137
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgccat 22
||||||||||||||||||||||
Sbjct: 17 agctcaggagggatagcgccat 38
>42785_zma-MIR390b:mirbase
Length = 192
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgcc 20
||||||||||||||||||||
Sbjct: 3 agctcaggagggatagcgcc 22
>42784_zma-MIR390a:mirbase
Length = 181
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgcc 20
||||||||||||||||||||
Sbjct: 3 agctcaggagggatagcgcc 22
>42565_sbi-MIR390:mirbase
Length = 179
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgcc 20
||||||||||||||||||||
Sbjct: 4 agctcaggagggatagcgcc 23
>41996_osa-MIR390:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgcc 20
||||||||||||||||||||
Sbjct: 20 agctcaggagggatagcgcc 39
>41773_bdi-MIR390b:mirbase
Length = 186
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgcc 20
||||||||||||||||||||
Sbjct: 20 agctcaggagggatagcgcc 39
>41772_bdi-MIR390:mirbase
Length = 209
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgcc 20
||||||||||||||||||||
Sbjct: 32 agctcaggagggatagcgcc 51
>41416_ptc-MIR390d:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgcc 20
||||||||||||||||||||
Sbjct: 12 agctcaggagggatagcgcc 31
>41414_ptc-MIR390b:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgcc 20
||||||||||||||||||||
Sbjct: 12 agctcaggagggatagcgcc 31
>40371_rco-MIR390a:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgcc 20
||||||||||||||||||||
Sbjct: 7 agctcaggagggatagcgcc 26
>39487_ppt-MIR390c:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgcc 20
||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33
>39486_ppt-MIR390b:mirbase
Length = 175
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agctcaggagggatagcgcc 20
||||||||||||||||||||
Sbjct: 29 agctcaggagggatagcgcc 48
