miRNEST 2.0, an integrative microRNA resource :: BLAST
>40070_ath-MIR319b:mirbase
Length = 172
Score = 268 bits (135), Expect = 1e-72
Identities = 159/167 (95%)
Strand = Plus / Plus
Query: 2 gagctttcttcggtccactcatagaataatatgtgagatttaattgactctcgactcatt 61
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 4 gagctttcttcggtccactcatggagtaatatgtgagatttaattgactctcgactcatt 63
Query: 62 catccaaataccaaatgaaagaatatgtagacatatggtaaatgaatgaatgatgctaga 121
|||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||
Sbjct: 64 catccaaataccaaatgaaagaatttgttctcatatggtaaatgaatgaatgatgcgaga 123
Query: 122 gacaaattgaatcttcacttctctatgcttggactgaagggagctcc 168
|||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 124 gacaaattgagtcttcacttctctatgcttggactgaagggagctcc 170
>39859_aly-MIR319b:mirbase
Length = 246
Score = 268 bits (135), Expect = 1e-72
Identities = 159/167 (95%)
Strand = Plus / Plus
Query: 2 gagctttcttcggtccactcatagaataatatgtgagatttaattgactctcgactcatt 61
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 43 gagctttcttcggtccactcatggagtaatatgtgagatttaattgactctcgactcatt 102
Query: 62 catccaaataccaaatgaaagaatatgtagacatatggtaaatgaatgaatgatgctaga 121
||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||
Sbjct: 103 catccaaataccaaatgaaagaacatgttctcatatggtaaatgaatgaatgatgcgaga 162
Query: 122 gacaaattgaatcttcacttctctatgcttggactgaagggagctcc 168
|||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 163 gacaaattgagtcttcacttctctatgcttggactgaagggagctcc 209
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 71.9 bits (36), Expect = 1e-13
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 101 aaatgaatgaatgatgctagagacaaattgaatcttcacttctctatgcttggactgaag 160
|||||| |||||||||| ||||||||||||||||| | || |||| ||||||||||||
Sbjct: 107 aaatgagtgaatgatgcgggagacaaattgaatcttaagtttcctatacttggactgaag 166
Query: 161 ggagctcc 168
||||||||
Sbjct: 167 ggagctcc 174
>41282_ctr-MIR319:mirbase
Length = 186
Score = 69.9 bits (35), Expect = 6e-13
Identities = 64/71 (90%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 99 gtaaatgaatgaatgatgctagagacaaattgaatcttca-cttctctatgcttggactg 157
|||||||| |||||||||| ||||||||||||||||| | |||| || |||||||||||
Sbjct: 106 gtaaatgagtgaatgatgcgggagacaaattgaatcttaagcttc-ctgtgcttggactg 164
Query: 158 aagggagctcc 168
|||||||||||
Sbjct: 165 aagggagctcc 175
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggagctttcttcggtccact 20
||||||||||||||||||||
Sbjct: 9 ggagctttcttcggtccact 28
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 67.9 bits (34), Expect = 2e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 99 gtaaatgaatgaatgatgctagagacaaattgaatcttcacttctctatgcttggactga 158
|||||||| |||||||||| ||||||||||| ||||| | || || ||||||||||||
Sbjct: 100 gtaaatgattgaatgatgcgggagacaaattggatcttaagctccctgtgcttggactga 159
Query: 159 agggagctcc 168
||||||||||
Sbjct: 160 agggagctcc 169
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 53 cgactcattcatccaaatac 72
||||||||||||||||||||
Sbjct: 62 cgactcattcatccaaatac 81
>40367_rco-MIR319a:mirbase
Length = 211
Score = 61.9 bits (31), Expect = 1e-10
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 99 gtaaatgaatgaatgatgctagagacaaattgaatcttca-cttctctatgcttggactg 157
|||||||| |||||||||| ||||||||||||||||| | |||| || | |||||||||
Sbjct: 135 gtaaatgagtgaatgatgcgggagacaaattgaatcttaagcttc-ctgtacttggactg 193
Query: 158 aagggagctcc 168
|||||||||||
Sbjct: 194 aagggagctcc 204
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 53 cgactcattcatccaaatac 72
||||||||||||||||||||
Sbjct: 56 cgactcattcatccaaatac 75
>40464_gma-MIR319a:mirbase
Length = 207
Score = 60.0 bits (30), Expect = 6e-10
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 103 atgaatgaatgatgctagagacaaattgaatcttcacttctctatgcttggactgaaggg 162
|||| |||||||||| ||||||||||||||||| | || || | ||||||||||||||
Sbjct: 122 atgagtgaatgatgcgggagacaaattgaatcttaagtttcctgtacttggactgaaggg 181
Query: 163 agctcc 168
||||||
Sbjct: 182 agctcc 187
>40069_ath-MIR319a:mirbase
Length = 176
Score = 58.0 bits (29), Expect = 2e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 100 taaatgaatgaatgatgctagagacaaattgaatcttcacttctctatgcttggactgaa 159
|||||||||||||||||| |||||||||| ||| | |||||| || ||||||||||
Sbjct: 104 taaatgaatgaatgatgcggtagacaaattggatcattgattctctttgattggactgaa 163
Query: 160 gggagctcc 168
|||||||||
Sbjct: 164 gggagctcc 172
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 cgactcattcatccaaatacc 73
|||||||||||||||||||||
Sbjct: 55 cgactcattcatccaaatacc 75
>39858_aly-MIR319a:mirbase
Length = 221
Score = 58.0 bits (29), Expect = 2e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 100 taaatgaatgaatgatgctagagacaaattgaatcttcacttctctatgcttggactgaa 159
|||||||||||||||||| |||||||||| ||| | |||||| || ||||||||||
Sbjct: 127 taaatgaatgaatgatgcggtagacaaattggatcattgattctctttgattggactgaa 186
Query: 160 gggagctcc 168
|||||||||
Sbjct: 187 gggagctcc 195
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 cgactcattcatccaaatacc 73
|||||||||||||||||||||
Sbjct: 78 cgactcattcatccaaatacc 98
>40465_gma-MIR319b:mirbase
Length = 208
Score = 56.0 bits (28), Expect = 9e-09
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 101 aaatgaatgaatgatgctagagacaaattgaatcttcacttctctatgcttggactgaag 160
|||||| |||||||||| |||||||||||| |||| | || || | ||||||||||||
Sbjct: 121 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 180
Query: 161 ggagctcc 168
||||||||
Sbjct: 181 ggagctcc 188
>41405_ptc-MIR319b:mirbase
Length = 185
Score = 54.0 bits (27), Expect = 3e-08
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 99 gtaaatgaatgaatgatgctagagacaaattgaatctt-cacttctctatgcttggactg 157
|||||||||||| |||||| |||||||||| |||||| ||||| |||| ||||||||
Sbjct: 106 gtaaatgaatgagtgatgcgggagacaaattaaatcttaaacttc-ctatcattggactg 164
Query: 158 aagggagctcc 168
|||||||||||
Sbjct: 165 aagggagctcc 175
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 53 cgactcattcatccaaatac 72
||||||||||||||||||||
Sbjct: 62 cgactcattcatccaaatac 81
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 54.0 bits (27), Expect = 3e-08
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 99 gtaaatgaatgaatgatgctagagacaaattgaatcttca-cttctctatgcttggactg 157
|||||||| |||||||||| ||||||||||||||| | | |||| || | |||||||||
Sbjct: 109 gtaaatgagtgaatgatgcgggagacaaattgaatcctaagcttc-ctgtacttggactg 167
Query: 158 aagggagctcc 168
|||||||||||
Sbjct: 168 aagggagctcc 178
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 53 cgactcattcatccaaatac 72
||||||||||||||||||||
Sbjct: 62 cgactcattcatccaaatac 81
>40369_rco-MIR319c:mirbase
Length = 188
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 134 cttcacttctctatgcttggactgaagggagctcc 168
|||| ||||||| ||||||||||||||||||||||
Sbjct: 147 cttctcttctctgtgcttggactgaagggagctcc 181
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 139 cttctctatgcttggactgaagggagctcc 168
||||||| ||||||||||||||||||||||
Sbjct: 154 cttctctgtgcttggactgaagggagctcc 183
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 139 cttctctatgcttggactgaagggagctcc 168
||||||| ||||||||||||||||||||||
Sbjct: 157 cttctctgtgcttggactgaagggagctcc 186
>42642_tae-MIR319:mirbase
Length = 211
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 146 atgcttggactgaagggagctcc 168
|||||||||||||||||||||||
Sbjct: 180 atgcttggactgaagggagctcc 202
>41770_bdi-MIR319:mirbase
Length = 280
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 146 atgcttggactgaagggagctcc 168
|||||||||||||||||||||||
Sbjct: 222 atgcttggactgaagggagctcc 244
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 tgcttggactgaagggagctcc 168
||||||||||||||||||||||
Sbjct: 159 tgcttggactgaagggagctcc 180
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 tgcttggactgaagggagctcc 168
||||||||||||||||||||||
Sbjct: 173 tgcttggactgaagggagctcc 194
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 tgcttggactgaagggagctcc 168
||||||||||||||||||||||
Sbjct: 171 tgcttggactgaagggagctcc 192
>40703_mtr-MIR319:mirbase
Length = 207
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 tgcttggactgaagggagctcc 168
||||||||||||||||||||||
Sbjct: 166 tgcttggactgaagggagctcc 187
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 148 gcttggactgaagggagctcc 168
|||||||||||||||||||||
Sbjct: 408 gcttggactgaagggagctcc 428
>40466_gma-MIR319c:mirbase
Length = 221
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 140 ttctctatgcttggactgaagggagctcc 168
|||||| ||||||||||||| ||||||||
Sbjct: 173 ttctctgtgcttggactgaaaggagctcc 201
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctcc 181
>41544_sly-MIR319:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 149 cttggactgaagggagctcc 168
>41185_aqc-MIR319:mirbase
Length = 177
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctcc 173
>40368_rco-MIR319b:mirbase
Length = 179
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 153 cttggactgaagggagctcc 172
>39740_smo-MIR319:mirbase
Length = 215
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctcc 204
>39484_ppt-MIR319e:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctcc 166
>39483_ppt-MIR319d:mirbase
Length = 170
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctcc 164
>39482_ppt-MIR319c:mirbase
Length = 189
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctcc 173
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcc 159
>39480_ppt-MIR319a:mirbase
Length = 169
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
