miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42089_osa-MIR444d:mirbase
Length = 143
Score = 220 bits (111), Expect = 2e-58
Identities = 111/111 (100%)
Strand = Plus / Plus
Query: 1 gcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatcattagatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 gcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatcattagatga 77
Query: 61 ttacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 ttacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgc 128
Score = 61.9 bits (31), Expect = 9e-11
Identities = 88/105 (83%), Gaps = 4/105 (3%)
Strand = Plus / Minus
Query: 5 caagcatgaggcaacaactgcattacttgcaagaaaggcacaa--aatcattagatgatt 62
||||| ||||||| |||||||| ||||||||||||| ||||| |||||| ||||||
Sbjct: 124 caagcttgaggcagcaactgcacaacttgcaagaaagccacaagtaatcatctaatgatt 65
Query: 63 acttgtggctttcttgcaagttgtgcagttgctgcctcaagcttg 107
||||| ||||||||||||| |||||||| ||||||| |||||
Sbjct: 64 --ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttg 22
>42088_osa-MIR444d:mirbase
Length = 143
Score = 220 bits (111), Expect = 2e-58
Identities = 111/111 (100%)
Strand = Plus / Plus
Query: 1 gcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatcattagatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 gcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatcattagatga 77
Query: 61 ttacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 ttacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgc 128
Score = 61.9 bits (31), Expect = 9e-11
Identities = 88/105 (83%), Gaps = 4/105 (3%)
Strand = Plus / Minus
Query: 5 caagcatgaggcaacaactgcattacttgcaagaaaggcacaa--aatcattagatgatt 62
||||| ||||||| |||||||| ||||||||||||| ||||| |||||| ||||||
Sbjct: 124 caagcttgaggcagcaactgcacaacttgcaagaaagccacaagtaatcatctaatgatt 65
Query: 63 acttgtggctttcttgcaagttgtgcagttgctgcctcaagcttg 107
||||| ||||||||||||| |||||||| ||||||| |||||
Sbjct: 64 --ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttg 22
>42087_osa-MIR444d:mirbase
Length = 143
Score = 220 bits (111), Expect = 2e-58
Identities = 111/111 (100%)
Strand = Plus / Plus
Query: 1 gcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatcattagatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 gcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatcattagatga 77
Query: 61 ttacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 ttacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgc 128
Score = 61.9 bits (31), Expect = 9e-11
Identities = 88/105 (83%), Gaps = 4/105 (3%)
Strand = Plus / Minus
Query: 5 caagcatgaggcaacaactgcattacttgcaagaaaggcacaa--aatcattagatgatt 62
||||| ||||||| |||||||| ||||||||||||| ||||| |||||| ||||||
Sbjct: 124 caagcttgaggcagcaactgcacaacttgcaagaaagccacaagtaatcatctaatgatt 65
Query: 63 acttgtggctttcttgcaagttgtgcagttgctgcctcaagcttg 107
||||| ||||||||||||| |||||||| ||||||| |||||
Sbjct: 64 --ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttg 22
>42479_ssp-MIR444b:mirbase
Length = 106
Score = 117 bits (59), Expect = 2e-27
Identities = 96/106 (90%), Gaps = 3/106 (2%)
Strand = Plus / Plus
Query: 5 caagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatcattag-atgat-- 61
||||||||||||| |||||||||||||||||||||| |||||||||| | | | |||
Sbjct: 1 caagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaggatca 60
Query: 62 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttg 107
|||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 61 tacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttg 106
Score = 54.0 bits (27), Expect = 2e-08
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 5 caagcatgaggcaacaactgcattacttgcaagaaaggcacaa 47
||||| |||||||||||||||| ||||||||||||| |||||
Sbjct: 106 caagcttgaggcaacaactgcacaacttgcaagaaagccacaa 64
Score = 46.1 bits (23), Expect = 5e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 65 ttgtggctttcttgcaagttgtgcagttgctgcctcaagcttg 107
||||| ||||||||||||| ||||||| |||||||| |||||
Sbjct: 43 ttgtgactttcttgcaagtaatgcagttcctgcctcatgcttg 1
>42478_ssp-MIR444a:mirbase
Length = 105
Score = 105 bits (53), Expect = 7e-24
Identities = 94/105 (89%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 5 caagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatcattag-atgat-t 62
||||||||||||| |||||||||||||||||||||| |||||||||| | | | || |
Sbjct: 1 caagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaggacat 60
Query: 63 acttgtggctttcttgcaagttgtgcagttgctgcctcaagcttg 107
|||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 61 acttgtggttttcttgcaagttgtgcagttgttgcctcaagcttg 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 5 caagcatgaggcaacaactgcattacttgcaagaaa 40
||||| |||||||||||||||| ||||||||||||
Sbjct: 105 caagcttgaggcaacaactgcacaacttgcaagaaa 70
Score = 46.1 bits (23), Expect = 5e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 65 ttgtggctttcttgcaagttgtgcagttgctgcctcaagcttg 107
||||| ||||||||||||| ||||||| |||||||| |||||
Sbjct: 43 ttgtgactttcttgcaagtaatgcagttcctgcctcatgcttg 1
>42649_tae-MIR444b:mirbase
Length = 162
Score = 91.7 bits (46), Expect = 1e-19
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 62 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
|||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 100 tacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgc 149
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 gcaccaagcatgaggcaacaactgcattacttgc 34
||||| ||||||||||||||||||||||||||||
Sbjct: 16 gcaccgagcatgaggcaacaactgcattacttgc 49
Score = 46.1 bits (23), Expect = 5e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 5 caagcatgaggcaacaactgcattacttgcaagaaaggcacaa 47
||||| ||||||| |||||||| ||||||||||||| |||||
Sbjct: 145 caagcttgaggcagcaactgcacgacttgcaagaaagccacaa 103
>41893_hvu-MIR444a:mirbase
Length = 114
Score = 91.7 bits (46), Expect = 1e-19
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 62 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
|||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 63 tacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgc 112
Score = 46.1 bits (23), Expect = 5e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 5 caagcatgaggcaacaactgcattacttgcaagaaaggcacaa 47
||||| ||||||| |||||||| ||||||||||||| |||||
Sbjct: 108 caagcttgaggcagcaactgcacgacttgcaagaaagccacaa 66
>41894_hvu-MIR444b:mirbase
Length = 121
Score = 89.7 bits (45), Expect = 4e-19
Identities = 96/112 (85%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 1 gcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatcattagatga 60
|||||||||||||||||||||||||||||||| |||| ||| |||||||| | | |
Sbjct: 5 gcaccaagcatgaggcaacaactgcattactttcaaggaagttacaaaatctatgggtct 64
Query: 61 t--tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctg 110
| || | ||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 65 tcataatcgtgactttcttgcaagttgtgcagttgctgtctcaagcttgctg 116
>42648_tae-MIR444:mirbase
Length = 426
Score = 85.7 bits (43), Expect = 6e-18
Identities = 82/95 (86%), Gaps = 5/95 (5%)
Strand = Plus / Plus
Query: 22 ctgcattacttgcaagaaaggcacaaaatcattagatgat-----tacttgtggctttct 76
||||||||||||||| ||||| |||||| | |||| ||| |||||||||||||||
Sbjct: 79 ctgcattacttgcaaacaaggcgcaaaattaatagaagatcaccatacttgtggctttct 138
Query: 77 tgcaagttgtgcagttgctgcctcaagcttgctgc 111
||||||| ||||||||||||||||||||||||||
Sbjct: 139 tgcaagtcatgcagttgctgcctcaagcttgctgc 173
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 gcaccaagcatgaggcaacaactgcattacttgc 34
||||| ||||||||||||||||||||||||||||
Sbjct: 23 gcaccgagcatgaggcaacaactgcattacttgc 56
Score = 54.0 bits (27), Expect = 2e-08
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 5 caagcatgaggcaacaactgcattacttgcaagaaaggcacaa 47
||||| ||||||| ||||||||| ||||||||||||| |||||
Sbjct: 169 caagcttgaggcagcaactgcatgacttgcaagaaagccacaa 127
>42091_osa-MIR444f:mirbase
Length = 154
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 71 ctttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
||||||||||||||||||||||| |||||||||||||||||
Sbjct: 109 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgc 149
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 1 gcaccaagcatgaggcaacaactgcattacttgcaag 37
||||||||||||||| ||||||||||||||||||||
Sbjct: 7 gcaccaagcatgaggttacaactgcattacttgcaag 43
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 5 caagcatgaggcaacaactgcattacttgcaagaaag 41
||||| |||||||||||||||| |||||||||||||
Sbjct: 145 caagcttgaggcaacaactgcacaacttgcaagaaag 109
>42082_osa-MIR444a:mirbase
Length = 131
Score = 69.9 bits (35), Expect = 4e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 73 ttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagcttgctgc 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 5 caagcatgaggcaacaactgcattacttgcaagaa 39
||||| ||||||| ||||||||| |||||||||||
Sbjct: 115 caagcttgaggcagcaactgcataacttgcaagaa 81
>42081_osa-MIR444a:mirbase
Length = 131
Score = 69.9 bits (35), Expect = 4e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 73 ttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagcttgctgc 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 5 caagcatgaggcaacaactgcattacttgcaagaa 39
||||| ||||||| ||||||||| |||||||||||
Sbjct: 115 caagcttgaggcagcaactgcataacttgcaagaa 81
>42480_ssp-MIR444c:mirbase
Length = 108
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 72 tttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
|||||||||||||||||||||| || ||||||||||||||
Sbjct: 68 tttcttgcaagttgtgcagttgttgtctcaagcttgctgc 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 72 tttcttgcaagttgtgcagttgctgcctcaagcttg 107
||||||||||| | ||||||||||||||| ||||||
Sbjct: 41 tttcttgcaagatatgcagttgctgcctctagcttg 6
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 5 caagcatgaggcaacaactgcattacttgcaagaaa 40
||||| |||| ||||||||||| ||||||||||||
Sbjct: 103 caagcttgagacaacaactgcacaacttgcaagaaa 68
>42084_osa-MIR444b:mirbase
Length = 138
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 72 tttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
|||||||||||||||||||||| || ||||||||||||||
Sbjct: 86 tttcttgcaagttgtgcagttgttgtctcaagcttgctgc 125
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 72 tttcttgcaagttgtgcagttgctgcctcaagcttg 107
||||||||||| ||||||||||||||| ||||||||
Sbjct: 53 tttcttgcaagatgtgcagttgctgccacaagcttg 18
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 5 caagcatgaggcaacaactgcattacttgcaagaaa 40
||||| |||| ||||||||||| ||||||||||||
Sbjct: 121 caagcttgagacaacaactgcacaacttgcaagaaa 86
>42083_osa-MIR444b:mirbase
Length = 138
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 72 tttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
|||||||||||||||||||||| || ||||||||||||||
Sbjct: 86 tttcttgcaagttgtgcagttgttgtctcaagcttgctgc 125
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 72 tttcttgcaagttgtgcagttgctgcctcaagcttg 107
||||||||||| ||||||||||||||| ||||||||
Sbjct: 53 tttcttgcaagatgtgcagttgctgccacaagcttg 18
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 5 caagcatgaggcaacaactgcattacttgcaagaaa 40
||||| |||| ||||||||||| ||||||||||||
Sbjct: 121 caagcttgagacaacaactgcacaacttgcaagaaa 86
>42086_osa-MIR444c:mirbase
Length = 138
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 72 tttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
||||||||||| |||||||||| || ||||||||||||||
Sbjct: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgc 123
Score = 42.1 bits (21), Expect = 8e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 72 tttcttgcaagttgtgcagttgctgcctcaagcttgc 108
||||||||||| | ||||||||||| ||| |||||||
Sbjct: 57 tttcttgcaagatatgcagttgctgtctctagcttgc 21
>42085_osa-MIR444c:mirbase
Length = 138
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 72 tttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
||||||||||| |||||||||| || ||||||||||||||
Sbjct: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgc 123
Score = 42.1 bits (21), Expect = 8e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 72 tttcttgcaagttgtgcagttgctgcctcaagcttgc 108
||||||||||| | ||||||||||| ||| |||||||
Sbjct: 57 tttcttgcaagatatgcagttgctgtctctagcttgc 21
>41805_bdi-MIR444:mirbase
Length = 110
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 80 aagttgtgcagttgctgcctcaagcttgctgc 111
||||| ||||||||||||||||||||||||||
Sbjct: 79 aagttatgcagttgctgcctcaagcttgctgc 110
>42090_osa-MIR444e:mirbase
Length = 140
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 78 gcaagttgtgcagttgctgcctcaagcttgctgc 111
||||||| ||||||||||||||||||||| ||||
Sbjct: 91 gcaagttatgcagttgctgcctcaagcttactgc 124
