miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41063_ghr-MIR399d:mirbase
          Length = 98

 Score =  141 bits (71), Expect = 7e-35
 Identities = 71/71 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  ggcaactctccttaagcaaaaatggatgtgcttttctttgcataattcgattttgccaaa 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 ggcaactctccttaagcaaaaatggatgtgcttttctttgcataattcgattttgccaaa 73

                     
Query: 61 ggagatttgcc 71
          |||||||||||
Sbjct: 74 ggagatttgcc 84




>41892_hvu-MIR399:mirbase
          Length = 131

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 52 tttgccaaaggagatttgcc 71
          ||||||||||||||||||||
Sbjct: 19 tttgccaaaggagatttgcc 38



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 52  tttgccaaaggagatttgcc 71
           ||||||||||||||||||||
Sbjct: 100 tttgccaaaggagatttgcc 119




>40739_mtr-MIR399i:mirbase
          Length = 90

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 52 tttgccaaaggagatttgcc 71
          ||||||||||||||||||||
Sbjct: 63 tttgccaaaggagatttgcc 82




>40738_mtr-MIR399h:mirbase
          Length = 90

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 52 tttgccaaaggagatttgcc 71
          ||||||||||||||||||||
Sbjct: 63 tttgccaaaggagatttgcc 82




>40733_mtr-MIR399c:mirbase
          Length = 119

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 52 tttgccaaaggagatttgcc 71
          ||||||||||||||||||||
Sbjct: 78 tttgccaaaggagatttgcc 97




>41458_ptc-MIR399k:mirbase
          Length = 94

 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 52 tttgccaaaggagatttgc 70
          |||||||||||||||||||
Sbjct: 64 tttgccaaaggagatttgc 82




>41151_tcc-MIR399f:mirbase
          Length = 111

 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                         
Query: 41 cataattcgattttgccaaaggagatttgcc 71
          |||| ||| ||||||||| ||||||||||||
Sbjct: 58 catagttctattttgccagaggagatttgcc 88




>39893_aly-MIR399j:mirbase
          Length = 136

 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 53  ttgccaaaggagatttgcc 71
           |||||||||||||||||||
Sbjct: 95  ttgccaaaggagatttgcc 113




>39891_aly-MIR399h:mirbase
          Length = 106

 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 53 ttgccaaaggagatttgcc 71
          |||||||||||||||||||
Sbjct: 81 ttgccaaaggagatttgcc 99