miRNEST 2.0, an integrative microRNA resource :: BLAST
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 125 agcgaattggatcccgccttgcatcaactga 155
|||||||||||||||||||||||||||||||
Sbjct: 122 agcgaattggatcccgccttgcatcaactga 152
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgtttcg 29
|||||||||||||||||||||||| ||||
Sbjct: 11 tcgcttggtgcaggtcgggaactgattcg 39
>41215_crt-MIR168:mirbase
Length = 201
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 126 gcgaattggatcccgccttgcatcaactga 155
||||||||||||||||||||||||||||||
Sbjct: 132 gcgaattggatcccgccttgcatcaactga 161
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactg 24
||||||||||||||||||||||||
Sbjct: 21 tcgcttggtgcaggtcgggaactg 44
>41210_ccl-MIR168:mirbase
Length = 176
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 126 gcgaattggatcccgccttgcatcaactga 155
||||||||||||||||||||||||||||||
Sbjct: 131 gcgaattggatcccgccttgcatcaactga 160
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactg 24
||||||||||||||||||||||||
Sbjct: 20 tcgcttggtgcaggtcgggaactg 43
>41101_tcc-MIR168:mirbase
Length = 167
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 127 cgaattggatcccgccttgcatcaactga 155
|||||||||||||||||||||||||||||
Sbjct: 117 cgaattggatcccgccttgcatcaactga 145
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactg 24
||||||||||||||||||||||||
Sbjct: 21 tcgcttggtgcaggtcgggaactg 44
>40448_gma-MIR168:mirbase
Length = 125
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 127 cgaattggatcccgccttgcatcaactga 155
|||||||||||||||||||||||||||||
Sbjct: 78 cgaattggatcccgccttgcatcaactga 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 19 tcgcttggtgcaggtcgggaac 40
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 128 gaattggatcccgccttgcatcaactga 155
||||||||||||||||||||||||||||
Sbjct: 101 gaattggatcccgccttgcatcaactga 128
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgtttcg 29
|||||||||||||||||||||||| ||||
Sbjct: 11 tcgcttggtgcaggtcgggaactgattcg 39
>40355_rco-MIR168:mirbase
Length = 131
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 128 gaattggatcccgccttgcatcaactga 155
||||||||||||||||||||||||||||
Sbjct: 97 gaattggatcccgccttgcatcaactga 124
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgtttcgctttt 34
|||||||||||||||||||||||| || ||||||
Sbjct: 6 tcgcttggtgcaggtcgggaactgattggctttt 39
>40043_ath-MIR168a:mirbase
Length = 138
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 130 attggatcccgccttgcatcaactga 155
||||||||||||||||||||||||||
Sbjct: 96 attggatcccgccttgcatcaactga 121
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaac 39
>39832_aly-MIR168a:mirbase
Length = 155
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 130 attggatcccgccttgcatcaactga 155
||||||||||||||||||||||||||
Sbjct: 102 attggatcccgccttgcatcaactga 127
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 24 tcgcttggtgcaggtcgggaac 45
>40271_bna-MIR168:mirbase
Length = 133
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactg 24
||||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaactg 41
>40044_ath-MIR168b:mirbase
Length = 124
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactg 24
||||||||||||||||||||||||
Sbjct: 19 tcgcttggtgcaggtcgggaactg 42
>39833_aly-MIR168b:mirbase
Length = 176
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactg 24
||||||||||||||||||||||||
Sbjct: 43 tcgcttggtgcaggtcgggaactg 66
>41596_vvi-MIR168:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcgggaac 32
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 134 gatcccgccttgcatcaactga 155
||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactga 120
>41963_osa-MIR168b:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 gcttggtgcaggtcgggaactgtt 26
||||||||||| ||||||||||||
Sbjct: 13 gcttggtgcagctcgggaactgtt 36
