miRNEST 2.0, an integrative microRNA resource :: BLAST
>42478_ssp-MIR444a:mirbase
Length = 105
Score = 204 bits (103), Expect = 9e-54
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 1 aagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaggacata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaggacata 61
Query: 61 cttgtggttttcttgcaagttgtgcagttgttgcctcaagctt 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cttgtggttttcttgcaagttgtgcagttgttgcctcaagctt 104
>42479_ssp-MIR444b:mirbase
Length = 106
Score = 182 bits (92), Expect = 3e-47
Identities = 102/104 (98%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 1 aagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcagga-cat 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2 aagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaggatcat 61
Query: 60 acttgtggttttcttgcaagttgtgcagttgttgcctcaagctt 103
|||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 62 acttgtggctttcttgcaagttgtgcagttgttgcctcaagctt 105
>42089_osa-MIR444d:mirbase
Length = 143
Score = 101 bits (51), Expect = 1e-22
Identities = 92/103 (89%), Gaps = 2/103 (1%)
Strand = Plus / Plus
Query: 1 aagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaggacata 60
|||||||||||| |||||||||||||||||||||| |||||||||| | | | || ||
Sbjct: 23 aagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatcattag-atgat-ta 80
Query: 61 cttgtggttttcttgcaagttgtgcagttgttgcctcaagctt 103
||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 81 cttgtggctttcttgcaagttgtgcagttgctgcctcaagctt 123
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 69 tttcttgcaagttgtgcagttgttgcctcaagctt 103
|||||||||||| |||||||||||||||| ||||
Sbjct: 57 tttcttgcaagtaatgcagttgttgcctcatgctt 23
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1 aagcatgaggcaggaactgcattacttgcaagaaagtcacaa 42
|||| |||||||| ||||||| ||||||||||||| |||||
Sbjct: 123 aagcttgaggcagcaactgcacaacttgcaagaaagccacaa 82
>42088_osa-MIR444d:mirbase
Length = 143
Score = 101 bits (51), Expect = 1e-22
Identities = 92/103 (89%), Gaps = 2/103 (1%)
Strand = Plus / Plus
Query: 1 aagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaggacata 60
|||||||||||| |||||||||||||||||||||| |||||||||| | | | || ||
Sbjct: 23 aagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatcattag-atgat-ta 80
Query: 61 cttgtggttttcttgcaagttgtgcagttgttgcctcaagctt 103
||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 81 cttgtggctttcttgcaagttgtgcagttgctgcctcaagctt 123
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 69 tttcttgcaagttgtgcagttgttgcctcaagctt 103
|||||||||||| |||||||||||||||| ||||
Sbjct: 57 tttcttgcaagtaatgcagttgttgcctcatgctt 23
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1 aagcatgaggcaggaactgcattacttgcaagaaagtcacaa 42
|||| |||||||| ||||||| ||||||||||||| |||||
Sbjct: 123 aagcttgaggcagcaactgcacaacttgcaagaaagccacaa 82
>42087_osa-MIR444d:mirbase
Length = 143
Score = 101 bits (51), Expect = 1e-22
Identities = 92/103 (89%), Gaps = 2/103 (1%)
Strand = Plus / Plus
Query: 1 aagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaggacata 60
|||||||||||| |||||||||||||||||||||| |||||||||| | | | || ||
Sbjct: 23 aagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatcattag-atgat-ta 80
Query: 61 cttgtggttttcttgcaagttgtgcagttgttgcctcaagctt 103
||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 81 cttgtggctttcttgcaagttgtgcagttgctgcctcaagctt 123
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 69 tttcttgcaagttgtgcagttgttgcctcaagctt 103
|||||||||||| |||||||||||||||| ||||
Sbjct: 57 tttcttgcaagtaatgcagttgttgcctcatgctt 23
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1 aagcatgaggcaggaactgcattacttgcaagaaagtcacaa 42
|||| |||||||| ||||||| ||||||||||||| |||||
Sbjct: 123 aagcttgaggcagcaactgcacaacttgcaagaaagccacaa 82
>42649_tae-MIR444b:mirbase
Length = 162
Score = 69.9 bits (35), Expect = 3e-13
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 57 catacttgtggttttcttgcaagttgtgcagttgttgcctcaagctt 103
||||||||||| |||||||||||| ||||||||| ||||||||||||
Sbjct: 98 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 144
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1 aagcatgaggcaggaactgcattacttgcaagaaagtcacaa 42
|||| |||||||| ||||||| ||||||||||||| |||||
Sbjct: 144 aagcttgaggcagcaactgcacgacttgcaagaaagccacaa 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 2 agcatgaggcaggaactgcattacttgc 29
||||||||||| |||||||||||||||
Sbjct: 22 agcatgaggcaacaactgcattacttgc 49
>42091_osa-MIR444f:mirbase
Length = 154
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 69 tttcttgcaagttgtgcagttgttgcctcaagctt 103
|||||||||||||||||||||||||||||||||||
Sbjct: 110 tttcttgcaagttgtgcagttgttgcctcaagctt 144
>41893_hvu-MIR444a:mirbase
Length = 114
Score = 69.9 bits (35), Expect = 3e-13
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 57 catacttgtggttttcttgcaagttgtgcagttgttgcctcaagctt 103
||||||||||| |||||||||||| ||||||||| ||||||||||||
Sbjct: 61 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 107
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1 aagcatgaggcaggaactgcattacttgcaagaaagtcacaa 42
|||| |||||||| ||||||| ||||||||||||| |||||
Sbjct: 107 aagcttgaggcagcaactgcacgacttgcaagaaagccacaa 66
>42480_ssp-MIR444c:mirbase
Length = 108
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 68 ttttcttgcaagttgtgcagttgttgcctcaagctt 103
|||||||||||||||||||||||||| |||||||||
Sbjct: 67 ttttcttgcaagttgtgcagttgttgtctcaagctt 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 68 ttttcttgcaagttgtgcagttgttgcctcaagctt 103
|||||||||||| | |||||||| |||||| |||||
Sbjct: 42 ttttcttgcaagatatgcagttgctgcctctagctt 7
>42084_osa-MIR444b:mirbase
Length = 138
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 68 ttttcttgcaagttgtgcagttgttgcctcaagctt 103
|||||||||||||||||||||||||| |||||||||
Sbjct: 85 ttttcttgcaagttgtgcagttgttgtctcaagctt 120
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 68 ttttcttgcaagttgtgcagttgttgcctcaagctt 103
|||||||||||| |||||||||| |||| |||||||
Sbjct: 54 ttttcttgcaagatgtgcagttgctgccacaagctt 19
>42083_osa-MIR444b:mirbase
Length = 138
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 68 ttttcttgcaagttgtgcagttgttgcctcaagctt 103
|||||||||||||||||||||||||| |||||||||
Sbjct: 85 ttttcttgcaagttgtgcagttgttgtctcaagctt 120
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 68 ttttcttgcaagttgtgcagttgttgcctcaagctt 103
|||||||||||| |||||||||| |||| |||||||
Sbjct: 54 ttttcttgcaagatgtgcagttgctgccacaagctt 19
>42648_tae-MIR444:mirbase
Length = 426
Score = 61.9 bits (31), Expect = 8e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 57 catacttgtggttttcttgcaagttgtgcagttgttgcctcaagctt 103
||||||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 122 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagctt 168
Score = 52.0 bits (26), Expect = 8e-08
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 1 aagcatgaggcaggaactgcattacttgcaagaaagtcacaa 42
|||| |||||||| |||||||| ||||||||||||| |||||
Sbjct: 168 aagcttgaggcagcaactgcatgacttgcaagaaagccacaa 127
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 2 agcatgaggcaggaactgcattacttgc 29
||||||||||| |||||||||||||||
Sbjct: 29 agcatgaggcaacaactgcattacttgc 56
>41894_hvu-MIR444b:mirbase
Length = 121
Score = 61.9 bits (31), Expect = 8e-11
Identities = 85/103 (82%)
Strand = Plus / Plus
Query: 1 aagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaggacata 60
|||||||||||| ||||||||||||| |||| |||| |||||||| || | ||||
Sbjct: 10 aagcatgaggcaacaactgcattactttcaaggaagttacaaaatctatgggtcttcata 69
Query: 61 cttgtggttttcttgcaagttgtgcagttgttgcctcaagctt 103
| ||| |||||||||||||||||||||| || |||||||||
Sbjct: 70 atcgtgactttcttgcaagttgtgcagttgctgtctcaagctt 112
Score = 40.1 bits (20), Expect = 3e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1 aagcatgaggcaggaactgcattacttgcaagaaagtcac 40
|||| |||| ||| ||||||| |||||||||||||||||
Sbjct: 112 aagcttgagacagcaactgcacaacttgcaagaaagtcac 73
>42086_osa-MIR444c:mirbase
Length = 138
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 68 ttttcttgcaagttgtgcagttgttgcctcaagctt 103
|||||||||||| ||||||||||||| |||||||||
Sbjct: 83 ttttcttgcaagctgtgcagttgttgtctcaagctt 118
>42085_osa-MIR444c:mirbase
Length = 138
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 68 ttttcttgcaagttgtgcagttgttgcctcaagctt 103
|||||||||||| ||||||||||||| |||||||||
Sbjct: 83 ttttcttgcaagctgtgcagttgttgtctcaagctt 118
>42082_osa-MIR444a:mirbase
Length = 131
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 70 ttcttgcaagttgtgcagttgttgcctcaagctt 103
|||||||||||| |||||||| ||||||||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagctt 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 1 aagcatgaggcaggaactgcattacttgcaagaa 34
|||| |||||||| |||||||| |||||||||||
Sbjct: 114 aagcttgaggcagcaactgcataacttgcaagaa 81
>42081_osa-MIR444a:mirbase
Length = 131
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 70 ttcttgcaagttgtgcagttgttgcctcaagctt 103
|||||||||||| |||||||| ||||||||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagctt 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 1 aagcatgaggcaggaactgcattacttgcaagaa 34
|||| |||||||| |||||||| |||||||||||
Sbjct: 114 aagcttgaggcagcaactgcataacttgcaagaa 81
>42090_osa-MIR444e:mirbase
Length = 140
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 75 gcaagttgtgcagttgttgcctcaagctt 103
||||||| |||||||| ||||||||||||
Sbjct: 91 gcaagttatgcagttgctgcctcaagctt 119
