miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41996_osa-MIR390:mirbase
          Length = 91

 Score =  109 bits (55), Expect = 2e-25
 Identities = 55/55 (100%)
 Strand = Plus / Plus

                                                                 
Query: 1  aagctcaggagggatagcgcctcgaaatcaaactaggcgctatctatcctgagct 55
          |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcctcgaaatcaaactaggcgctatctatcctgagct 73




>42785_zma-MIR390b:mirbase
          Length = 192

 Score = 44.1 bits (22), Expect = 9e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  aagctcaggagggatagcgcct 22
          ||||||||||||||||||||||
Sbjct: 2  aagctcaggagggatagcgcct 23



 Score = 38.2 bits (19), Expect = 6e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 37  gcgctatctatcctgagct 55
           |||||||||||||||||||
Sbjct: 170 gcgctatctatcctgagct 188




>42784_zma-MIR390a:mirbase
          Length = 181

 Score = 44.1 bits (22), Expect = 9e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  aagctcaggagggatagcgcct 22
          ||||||||||||||||||||||
Sbjct: 2  aagctcaggagggatagcgcct 23



 Score = 38.2 bits (19), Expect = 6e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 37  gcgctatctatcctgagct 55
           |||||||||||||||||||
Sbjct: 159 gcgctatctatcctgagct 177




>42565_sbi-MIR390:mirbase
          Length = 179

 Score = 44.1 bits (22), Expect = 9e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  aagctcaggagggatagcgcct 22
          ||||||||||||||||||||||
Sbjct: 3  aagctcaggagggatagcgcct 24



 Score = 38.2 bits (19), Expect = 6e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 37  gcgctatctatcctgagct 55
           |||||||||||||||||||
Sbjct: 157 gcgctatctatcctgagct 175




>41773_bdi-MIR390b:mirbase
          Length = 186

 Score = 44.1 bits (22), Expect = 9e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  aagctcaggagggatagcgcct 22
          ||||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcct 40



 Score = 38.2 bits (19), Expect = 6e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 37  gcgctatctatcctgagct 55
           |||||||||||||||||||
Sbjct: 146 gcgctatctatcctgagct 164




>41772_bdi-MIR390:mirbase
          Length = 209

 Score = 44.1 bits (22), Expect = 9e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  aagctcaggagggatagcgcct 22
          ||||||||||||||||||||||
Sbjct: 31 aagctcaggagggatagcgcct 52



 Score = 38.2 bits (19), Expect = 6e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 37  gcgctatctatcctgagct 55
           |||||||||||||||||||
Sbjct: 158 gcgctatctatcctgagct 176




>41640_vvi-MIR390:mirbase
          Length = 140

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcgcc 31




>41416_ptc-MIR390d:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcgcc 31




>41415_ptc-MIR390c:mirbase
          Length = 123

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcgcc 31




>41414_ptc-MIR390b:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcgcc 31




>41413_ptc-MIR390a:mirbase
          Length = 119

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcgcc 31




>41237_csi-MIR390:mirbase
          Length = 154

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 21 aagctcaggagggatagcgcc 41




>41131_tcc-MIR390b:mirbase
          Length = 120

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 21 aagctcaggagggatagcgcc 41




>41130_tcc-MIR390a:mirbase
          Length = 129

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 21 aagctcaggagggatagcgcc 41




>41053_ghr-MIR390c:mirbase
          Length = 114

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcgcc 31




>41052_ghr-MIR390b:mirbase
          Length = 132

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 18 aagctcaggagggatagcgcc 38




>41051_ghr-MIR390a:mirbase
          Length = 124

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 15 aagctcaggagggatagcgcc 35




>40705_mtr-MIR390:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 6  aagctcaggagggatagcgcc 26




>40468_gma-MIR390a:mirbase
          Length = 105

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcgcc 31




>40467_gma-MIR390a:mirbase
          Length = 105

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcgcc 31




>40372_rco-MIR390b:mirbase
          Length = 122

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 6  aagctcaggagggatagcgcc 26




>40371_rco-MIR390a:mirbase
          Length = 108

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 6  aagctcaggagggatagcgcc 26




>40294_bna-MIR390c:mirbase
          Length = 128

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 23 aagctcaggagggatagcgcc 43




>40293_bna-MIR390b:mirbase
          Length = 105

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 18 aagctcaggagggatagcgcc 38




>40292_bna-MIR390a:mirbase
          Length = 144

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 33 aagctcaggagggatagcgcc 53




>40073_ath-MIR390b:mirbase
          Length = 120

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 15 aagctcaggagggatagcgcc 35




>40072_ath-MIR390a:mirbase
          Length = 107

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 18 aagctcaggagggatagcgcc 38




>39863_aly-MIR390b:mirbase
          Length = 127

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcc 39




>39862_aly-MIR390a:mirbase
          Length = 129

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 29 aagctcaggagggatagcgcc 49




>39486_ppt-MIR390b:mirbase
          Length = 175

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 28 aagctcaggagggatagcgcc 48




>39485_ppt-MIR390a:mirbase
          Length = 137

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 16 aagctcaggagggatagcgcc 36




>39487_ppt-MIR390c:mirbase
          Length = 135

 Score = 40.1 bits (20), Expect = 1e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 2  agctcaggagggatagcgcc 21
          ||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33