miRNEST 2.0, an integrative microRNA resource :: BLAST
>41541_sly-MIR171d:mirbase
Length = 112
Score = 115 bits (58), Expect = 5e-27
Identities = 77/82 (93%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacgagtttacgttttgttttcgtaaagaacgatct 60
||||||||||||||||||||||||||||| |||| | || |||||||||||||||||||
Sbjct: 12 gatgttggtgaggttcaatccgaagacgaatttatgctta-ttttcgtaaagaacgatct 70
Query: 61 cagattgagccgcgccaatatc 82
||||||||||||||||||||||
Sbjct: 71 cagattgagccgcgccaatatc 92
>40365_rco-MIR171g:mirbase
Length = 89
Score = 83.8 bits (42), Expect = 2e-17
Identities = 73/82 (89%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacgagtttacgttttgttttcgtaaagaacgatct 60
|||||||||||||||||||||||||||| ||||| || | || |||||| |||||||
Sbjct: 4 gatgttggtgaggttcaatccgaagacggatttacacattctgtt-gtaaaggacgatct 62
Query: 61 cagattgagccgcgccaatatc 82
||||||||||||||||||||||
Sbjct: 63 cagattgagccgcgccaatatc 84
>41626_vvi-MIR171e:mirbase
Length = 103
Score = 71.9 bits (36), Expect = 7e-14
Identities = 71/82 (86%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacgagtttacgttttgttttcgtaaagaacgatct 60
|||||||||||||||||||||||||||| |||||| | |||||||||||||||
Sbjct: 12 gatgttggtgaggttcaatccgaagacggatttacgaagagc---cgtaaagaacgatct 68
Query: 61 cagattgagccgcgccaatatc 82
| ||||||||||||||||||||
Sbjct: 69 ctgattgagccgcgccaatatc 90
>41118_tcc-MIR171c:mirbase
Length = 123
Score = 69.9 bits (35), Expect = 3e-13
Identities = 73/85 (85%), Gaps = 3/85 (3%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacgagtttacgttttgttt---tcgtaaagaacga 57
|||||||||||||||||||||||||||| |||||| | || ||||||| ||||
Sbjct: 19 gatgttggtgaggttcaatccgaagacggatttacgcatgcattcagtcgtaaaatacga 78
Query: 58 tctcagattgagccgcgccaatatc 82
|||||||||||||||||||||||||
Sbjct: 79 tctcagattgagccgcgccaatatc 103
>40699_mtr-MIR171e:mirbase
Length = 93
Score = 65.9 bits (33), Expect = 4e-12
Identities = 73/84 (86%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacgagtttac--gttttgttttcgtaaagaacgat 58
|||||||||||||||||||||||||||| ||||| || | | || ||||| |||||
Sbjct: 6 gatgttggtgaggttcaatccgaagacggatttacatgtatagagtt-gtaaaatacgat 64
Query: 59 ctcagattgagccgcgccaatatc 82
||||||||||||||||||||||||
Sbjct: 65 ctcagattgagccgcgccaatatc 88
>41383_ptc-MIR171c:mirbase
Length = 104
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 54 acgatctcagattgagccgcgccaatatc 82
|||||||||||||||||||||||||||||
Sbjct: 67 acgatctcagattgagccgcgccaatatc 95
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacg 28
||||||||||||||||||||||||||||
Sbjct: 11 gatgttggtgaggttcaatccgaagacg 38
>41384_ptc-MIR171d:mirbase
Length = 100
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 55 cgatctcagattgagccgcgccaatatc 82
||||||||||||||||||||||||||||
Sbjct: 64 cgatctcagattgagccgcgccaatatc 91
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagac 27
|||||||||||||||||||||||||||
Sbjct: 11 gatgttggtgaggttcaatccgaagac 37
>41627_vvi-MIR171f:mirbase
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 56 gatctcagattgagccgcgccaatatc 82
|||||||||||||||||||||||||||
Sbjct: 64 gatctcagattgagccgcgccaatatc 90
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaaga 26
|||||||||||||||||||| |||||
Sbjct: 12 gatgttggtgaggttcaatctgaaga 37
>39479_ppt-MIR171b:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 ctcagattgagccgcgccaatatc 82
||||||||||||||||||||||||
Sbjct: 61 ctcagattgagccgcgccaatatc 84
>41117_tcc-MIR171b:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 tcagattgagccgcgccaatatc 82
|||||||||||||||||||||||
Sbjct: 78 tcagattgagccgcgccaatatc 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaaga 26
|||||||||||||||||||| |||||
Sbjct: 21 gatgttggtgaggttcaatctgaaga 46
>39478_ppt-MIR171a:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 tcagattgagccgcgccaatatc 82
|||||||||||||||||||||||
Sbjct: 61 tcagattgagccgcgccaatatc 83
>39739_smo-MIR171d:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 tctcagattgagccgcgccaatatc 82
||||| |||||||||||||||||||
Sbjct: 65 tctcaaattgagccgcgccaatatc 89
>42774_zma-MIR171n:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgcgccaatatc 82
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 5 ttggtgaggttcaatccga 23
|||||||||||||||||||
Sbjct: 4 ttggtgaggttcaatccga 22
>42761_zma-MIR171a:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgcgccaatatc 82
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>42555_sbi-MIR171j:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgcgccaatatc 82
||||||||||||||||||||
Sbjct: 84 gattgagccgcgccaatatc 103
>42552_sbi-MIR171g:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgcgccaatatc 82
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 5 ttggtgaggttcaatccga 23
|||||||||||||||||||
Sbjct: 3 ttggtgaggttcaatccga 21
>41981_osa-MIR171a:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgcgccaatatc 82
||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatc 87
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 5 ttggtgaggttcaatccga 23
|||||||||||||||||||
Sbjct: 14 ttggtgaggttcaatccga 32
>41764_bdi-MIR171a:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgcgccaatatc 82
||||||||||||||||||||
Sbjct: 51 gattgagccgcgccaatatc 70
>41540_sly-MIR171c:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgcgccaatatc 82
||||||||||||||||||||
Sbjct: 79 gattgagccgcgccaatatc 98
>41391_ptc-MIR171k:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgcgccaatatc 82
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>41231_csi-MIR171a:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgcgccaatatc 82
||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatc 87
>41211_ccl-MIR171:mirbase
Length = 321
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgcgccaatatc 82
||||||||||||||||||||
Sbjct: 123 gattgagccgcgccaatatc 142
>41116_tcc-MIR171a:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgcgccaatatc 82
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>40322_bra-MIR171e:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgcgccaatatc 82
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>40291_bna-MIR171g:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgcgccaatatc 82
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>40290_bna-MIR171f:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgcgccaatatc 82
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>40060_ath-MIR171a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgcgccaatatc 82
||||||||||||||||||||
Sbjct: 89 gattgagccgcgccaatatc 108
>39849_aly-MIR171a:mirbase
Length = 198
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgcgccaatatc 82
||||||||||||||||||||
Sbjct: 131 gattgagccgcgccaatatc 150
