miRNEST 2.0, an integrative microRNA resource :: BLAST
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgcttagtccatttagtattagatggcctttgtggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccatttgcttagtccatttagtattagatggcctttgtggat 60
Query: 61 ggcgtgcgaggagccatgca 80
||||||||||||||||||||
Sbjct: 61 ggcgtgcgaggagccatgca 80
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 63.9 bits (32), Expect = 2e-11
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgcttagtccatttagtattagatggcctttgtggat 60
|||||||||||||||||||||||||| || |||| || | | ||||||| ||||||
Sbjct: 21 tgcctggctccctgtatgccatttgcaaagcccatcaagagtccggtggccttcgtggat 80
Query: 61 ggcgtgcgaggagccatgca 80
||| ||||||||||||||||
Sbjct: 81 ggcatgcgaggagccatgca 100
>40019_ath-MIR160a:mirbase
Length = 85
Score = 56.0 bits (28), Expect = 4e-09
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgcttagtccatttagtattagatggcctttgtggat 60
|||||||||||||||||||||| |||| || |||| |||| | |||| ||| ||||||
Sbjct: 4 tgcctggctccctgtatgccatatgctgagcccatcgagta-tcgatgacctccgtggat 62
Query: 61 ggcgtgcgaggagccatgca 80
||||| |||||||||||||
Sbjct: 63 ggcgtatgaggagccatgca 82
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgc 26
||||||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccatttgc 36
Score = 48.1 bits (24), Expect = 9e-07
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 45 gatggcctttgtggatggcgtgcgaggagccatgca 80
||||||||| ||||||||||| |||||||||||||
Sbjct: 55 gatggccttcgtggatggcgtatgaggagccatgca 90
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgc 26
||||||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccatttgc 36
>41529_sly-MIR160a:mirbase
Length = 129
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgc 26
||||||||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgccatttgc 45
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgc 26
||||||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccatttgc 36
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgc 26
||||||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccatttgc 36
Score = 40.1 bits (20), Expect = 2e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 45 gatggcctttgtggatggcgtgcgaggagccatgca 80
|||||||| ||||||||||| |||||||||||||
Sbjct: 55 gatggcctccgtggatggcgtatgaggagccatgca 90
>41219_csi-MIR160:mirbase
Length = 143
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgc 26
||||||||||||||||||||||||||
Sbjct: 33 tgcctggctccctgtatgccatttgc 58
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttg 25
|||||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccatttg 30
>40658_mtr-MIR160:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttg 25
|||||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccatttg 45
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 atggcgtgcgaggagccatgca 80
||||||||||||||||||||||
Sbjct: 79 atggcgtgcgaggagccatgca 100
>40436_gma-MIR160:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttg 25
|||||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccatttg 45
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 50 cctttgtggatggcgtgcgaggagcca 76
|||||||||||||||| |||||||||
Sbjct: 70 cctttgtggatggcgtatgaggagcca 96
>40339_rco-MIR160a:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttg 25
|||||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccatttg 30
>39807_aly-MIR160a:mirbase
Length = 158
Score = 48.1 bits (24), Expect = 9e-07
Identities = 67/80 (83%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgcttagtccatttagtattagatggcctttgtggat 60
|||||||||||||||||||||| |||| || ||| |||| | |||| ||| ||||||
Sbjct: 42 tgcctggctccctgtatgccatatgctgagctcatcgagta-tcgatgacctccgtggat 100
Query: 61 ggcgtgcgaggagccatgca 80
||||| |||||||||||||
Sbjct: 101 ggcgtatgaggagccatgca 120
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgcttag 30
||||||||||||||||||||| | ||||||
Sbjct: 1 tgcctggctccctgtatgccactcgcttag 30
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 ggatggcgtgcgaggagcca 76
||||||||||||||||||||
Sbjct: 77 ggatggcgtgcgaggagcca 96
>41312_ptc-MIR160h:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgc 26
|||||||||||||| |||||||||||
Sbjct: 11 tgcctggctccctgcatgccatttgc 36
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccat 22
||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccat 27
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 50 cctttgtggatggcgtgcgaggagcca 76
|||||||||||||||| |||||||||
Sbjct: 55 cctttgtggatggcgtatgaggagcca 81
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccat 22
||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccat 27
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 50 cctttgtggatggcgtgcgaggagcca 76
|||||||||||||||| |||||||||
Sbjct: 55 cctttgtggatggcgtatgaggagcca 81
>40312_bra-MIR160a:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccat 22
||||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgccat 47
>39731_smo-MIR160a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccat 22
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgc 26
||||||||||||||||||||| ||||
Sbjct: 30 tgcctggctccctgtatgccacttgc 55
>39375_pab-MIR160b:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccat 22
||||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgccat 41
>42707_zma-MIR160g:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 2 tgcctggctccctgtatgcca 22
>42705_zma-MIR160e:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgcca 29
>42704_zma-MIR160d:mirbase
Length = 142
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>42703_zma-MIR160c:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>42702_zma-MIR160b:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>42701_zma-MIR160a:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgcca 30
>42677_ttu-MIR160:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgcca 29
>42636_tae-MIR160:mirbase
Length = 148
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 22 tgcctggctccctgtatgcca 42
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 ggatggcgtgcgaggagcca 76
||||||||||||||||||||
Sbjct: 88 ggatggcgtgcgaggagcca 107
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>41926_osa-MIR160d:mirbase
Length = 142
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 8 tgcctggctccctgtatgcca 28
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 ggatggcgtgcgaggagcca 76
||||||||||||||||||||
Sbjct: 114 ggatggcgtgcgaggagcca 133
>41925_osa-MIR160c:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>41924_osa-MIR160b:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>41923_osa-MIR160a:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>41869_far-MIR160:mirbase
Length = 148
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 53 tgcctggctccctgtatgcca 73
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 32 tgcctggctccctgtatgcca 52
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 ggatggcgtgcgaggagcca 76
||||||||||||||||||||
Sbjct: 119 ggatggcgtgcgaggagcca 138
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>40340_rco-MIR160b:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>40021_ath-MIR160c:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgcca 25
>40020_ath-MIR160b:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgcca 25
>39809_aly-MIR160c:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 24 tgcctggctccctgtatgcca 44
>39808_aly-MIR160b:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>39732_smo-MIR160b:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>39374_pab-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 14 tgcctggctccctgtatgcca 34
