miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40433_gma-MIR159b:mirbase
          Length = 186

 Score =  321 bits (162), Expect = 9e-89
 Identities = 162/162 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagttccctgcactccaagtctgaaaggatatgatggtaaacctctactgctagttcatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13  gagttccctgcactccaagtctgaaaggatatgatggtaaacctctactgctagttcatg 72

                                                                       
Query: 61  gatacctctgacttcttaacaacatgcgttcgaagtcaagggtttgcatgccctgggaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73  gatacctctgacttcttaacaacatgcgttcgaagtcaagggtttgcatgccctgggaga 132

                                                     
Query: 121 tgagtttaccttgatcttttggtattggagtgaagggagctc 162
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tgagtttaccttgatcttttggtattggagtgaagggagctc 174




>40434_gma-MIR159c:mirbase
          Length = 185

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                               
Query: 127 taccttgatcttttggtattggagtgaagggagctc 162
           |||||||||||||| |||||||||||||||||||||
Sbjct: 137 taccttgatcttttagtattggagtgaagggagctc 172




>41304_ptc-MIR159f:mirbase
          Length = 201

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 136 cttttggtattggagtgaagggagctc 162
           ||||| |||||||||||||||||||||
Sbjct: 165 ctttttgtattggagtgaagggagctc 191




>41303_ptc-MIR159e:mirbase
          Length = 192

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 56/66 (84%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                       
Query: 98  aagggtttgcatgccctgggagatgagtttaccttgatctttt-ggtattggagtgaagg 156
           |||||| ||||||  || ||||||| | || |||||||||||| ||| |||| |||||||
Sbjct: 116 aagggtctgcatgtgctaggagatgtggttgccttgatctttttggtcttggggtgaagg 175

                 
Query: 157 gagctc 162
           ||||||
Sbjct: 176 gagctc 181




>41920_osa-MIR159d:mirbase
          Length = 189

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 100 gggtttgcatgccctgggagatga 123
           ||||||||||| ||||||||||||
Sbjct: 111 gggtttgcatgacctgggagatga 134




>41570_vvi-MIR159a:mirbase
          Length = 194

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 54/64 (84%), Gaps = 1/64 (1%)
 Strand = Plus / Plus

                                                                       
Query: 100 gggtttgcatgccctgggagatgagtttaccttgatcttt-tggtattggagtgaaggga 158
           |||| |||||| ||| ||||| | | || ||||||||||| |||  ||||||||||||||
Sbjct: 119 gggtgtgcatgacctcggagaagtggttgccttgatctttctggccttggagtgaaggga 178

               
Query: 159 gctc 162
           ||||
Sbjct: 179 gctc 182