miRNEST 2.0, an integrative microRNA resource :: BLAST
>40432_gma-MIR159a:mirbase
Length = 214
Score = 331 bits (167), Expect = 1e-91
Identities = 170/171 (99%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 82
Query: 61 cccacagttctacccatcaataagtgcttttgtggtagtcttgtggcttccatatctggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 83 cccacagttctacccatcaataagtgcttttgtggtagtcttgtggcttccatatttggg 142
Query: 121 gagcttcatttgcctttatagtattaaccttctttggattgaagggagctc 171
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 gagcttcatttgcctttatagtattaaccttctttggattgaagggagctc 193
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 248 bits (125), Expect = 1e-66
Identities = 160/171 (93%), Gaps = 3/171 (1%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacagttctacccatcaataagtgcttttgtggtagtcttgtggcttccatatctggg 120
||||||||||||||||||| | | |||||||||||||||||||||||||||||||||
Sbjct: 64 cccacagttctacccatcagcatg---ttttgtggtagtcttgtggcttccatatctggg 120
Query: 121 gagcttcatttgcctttatagtattaaccttctttggattgaagggagctc 171
||||||||| ||||| |||||||| | ||||||||||||||||||||||||
Sbjct: 121 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctc 171
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 248 bits (125), Expect = 1e-66
Identities = 160/171 (93%), Gaps = 3/171 (1%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacagttctacccatcaataagtgcttttgtggtagtcttgtggcttccatatctggg 120
||||||||||||||||||| | | |||||||||||||||||||||||||||||||||
Sbjct: 64 cccacagttctacccatcagcatg---ttttgtggtagtcttgtggcttccatatctggg 120
Query: 121 gagcttcatttgcctttatagtattaaccttctttggattgaagggagctc 171
||||||||| ||||| |||||||| | ||||||||||||||||||||||||
Sbjct: 121 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctc 171
>40435_gma-MIR159d:mirbase
Length = 103
Score = 204 bits (103), Expect = 2e-53
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 33 gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 60
Query: 93 tggtagtcttgtggcttccatatctggggagcttcatttgcct 135
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggtagtcttgtggcttccatatctggggagcttcatttgcct 103
>40338_rco-MIR159:mirbase
Length = 180
Score = 85.7 bits (43), Expect = 1e-17
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 60
||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||
Sbjct: 6 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 65
Query: 61 cccacag 67
|||||||
Sbjct: 66 cccacag 72
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 148 ccttctttggattgaagggagctc 171
|||| |||||||||||||||||||
Sbjct: 150 ccttgtttggattgaagggagctc 173
>40397_ahy-MIR159:mirbase
Length = 197
Score = 81.8 bits (41), Expect = 2e-16
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 60
|||||||||||||||||| |||| |||| ||||| ||||||||||| ||||||||||
Sbjct: 5 gagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatggat 64
Query: 61 cccacagttctacccat 77
|||||||| ||||||||
Sbjct: 65 cccacagtactacccat 81
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 148 ccttctttggattgaagggagctc 171
|||| |||||||||||||||||||
Sbjct: 152 ccttatttggattgaagggagctc 175
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 77.8 bits (39), Expect = 2e-15
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 60
||||||||||||||||||| |||| ||||||||||| ||||||||||| | |||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 61 cccacag 67
|||||||
Sbjct: 71 cccacag 77
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 148 ccttctttggattgaagggagctc 171
|||| |||||||||||||||||||
Sbjct: 155 ccttgtttggattgaagggagctc 178
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 67.9 bits (34), Expect = 2e-12
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 60
||||||||||||||||||| |||| |||| |||||| ||| ||||||| ||||||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 72
Query: 61 cc 62
||
Sbjct: 73 cc 74
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 67.9 bits (34), Expect = 2e-12
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 60
||||||||||||||||||| |||| |||| |||||| ||| ||||||| ||||||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 72
Query: 61 cc 62
||
Sbjct: 73 cc 74
>41218_csi-MIR159:mirbase
Length = 216
Score = 58.0 bits (29), Expect = 2e-09
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaattgaggatcttact-gggtgaattgagctgcttagctatgga 59
|||||||||||||||||| |||| ||| | |||| |||||||||||| |||||||||
Sbjct: 14 gagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgga 73
Query: 60 tcccacagt 68
|||||||||
Sbjct: 74 tcccacagt 82
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 56.0 bits (28), Expect = 9e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 89 tttgtggtagtcttgtggcttccatatctggggagc 124
||||||||||| ||||||||||||||||| ||||||
Sbjct: 91 tttgtggtagttttgtggcttccatatctagggagc 126
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 54.0 bits (27), Expect = 4e-08
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 60
||||||||||||||||||| || | || | |||||| || |||||||| ||||||| ||
Sbjct: 13 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 72
Query: 61 cccacag 67
|||||||
Sbjct: 73 cccacag 79
>40311_bra-MIR159a:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 149 cttctttggattgaagggagctc 171
|||||||||||||||||||||||
Sbjct: 159 cttctttggattgaagggagctc 181
>40261_bna-MIR159:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 149 cttctttggattgaagggagctc 171
|||||||||||||||||||||||
Sbjct: 157 cttctttggattgaagggagctc 179
>40017_ath-MIR159b:mirbase
Length = 196
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 149 cttctttggattgaagggagctc 171
|||||||||||||||||||||||
Sbjct: 164 cttctttggattgaagggagctc 186
>40016_ath-MIR159a:mirbase
Length = 184
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 149 cttctttggattgaagggagctc 171
|||||||||||||||||||||||
Sbjct: 159 cttctttggattgaagggagctc 181
>39805_aly-MIR159b:mirbase
Length = 202
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 149 cttctttggattgaagggagctc 171
|||||||||||||||||||||||
Sbjct: 165 cttctttggattgaagggagctc 187
>39804_aly-MIR159a:mirbase
Length = 222
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 149 cttctttggattgaagggagctc 171
|||||||||||||||||||||||
Sbjct: 179 cttctttggattgaagggagctc 201
>42695_zma-MIR159f:mirbase
Length = 215
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctc 212
>42690_zma-MIR159a:mirbase
Length = 246
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctc 225
>42635_tae-MIR159b:mirbase
Length = 255
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctc 248
>42494_sbi-MIR159:mirbase
Length = 226
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 202 tctttggattgaagggagctc 222
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 221 tctttggattgaagggagctc 241
>42455_sof-MIR159d:mirbase
Length = 265
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctc 244
>42453_sof-MIR159b:mirbase
Length = 266
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctc 245
>42452_sof-MIR159a:mirbase
Length = 265
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctc 244
>41918_osa-MIR159b:mirbase
Length = 188
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctc 176
>41917_osa-MIR159a:mirbase
Length = 272
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctc 260
>41916_osa-MIR159a:mirbase
Length = 272
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctc 260
>41868_far-MIR159:mirbase
Length = 200
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 167 tctttggattgaagggagctc 187
