miRNEST 2.0, an integrative microRNA resource :: BLAST
>40478_gma-MIR398a:mirbase
Length = 116
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 aggagtgaatctgagaacacaaggctggtttgcactgctatatcatctattggtataagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 aggagtgaatctgagaacacaaggctggtttgcactgctatatcatctattggtataagg 65
Query: 61 tgaatttactttgtgttctcaggtcacccctt 92
||||||||||||||||||||||||||||||||
Sbjct: 66 tgaatttactttgtgttctcaggtcacccctt 97
>40479_gma-MIR398b:mirbase
Length = 135
Score = 137 bits (69), Expect = 2e-33
Identities = 89/95 (93%), Gaps = 3/95 (3%)
Strand = Plus / Plus
Query: 1 aggagtgaatctgagaacacaaggctggtttgcactgctatatcat---ctattggtata 57
||||||| ||||||||||||||||||||||||||||||||||| || | |||||||||
Sbjct: 22 aggagtggatctgagaacacaaggctggtttgcactgctatattatgatcgattggtata 81
Query: 58 aggtgaatttactttgtgttctcaggtcacccctt 92
|||||||||||||||||||||||||||||||||||
Sbjct: 82 aggtgaatttactttgtgttctcaggtcacccctt 116
>40403_ahy-MIR398:mirbase
Length = 153
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 63 aatttactttgtgttctcaggtcacccctt 92
||||||| ||||||||||||||||||||||
Sbjct: 120 aatttaccttgtgttctcaggtcacccctt 149
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 63 aatttactttgtgttctcaggt 84
||||||||||||||||||||||
Sbjct: 38 aatttactttgtgttctcaggt 17
>41665_vvi-MIR398a:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 tttgtgttctcaggtcacccctt 92
|||||||||||||||||||||||
Sbjct: 71 tttgtgttctcaggtcacccctt 93
>41190_aqc-MIR398a:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 tttgtgttctcaggtcacccctt 92
|||||||||||||||||||||||
Sbjct: 64 tttgtgttctcaggtcacccctt 86
>40728_mtr-MIR398a:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 tttgtgttctcaggtcacccctt 92
|||||||||||||||||||||||
Sbjct: 71 tttgtgttctcaggtcacccctt 93
>40089_ath-MIR398a:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 tttgtgttctcaggtcacccctt 92
|||||||||||||||||||||||
Sbjct: 73 tttgtgttctcaggtcacccctt 95
>39881_aly-MIR398a:mirbase
Length = 182
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 tttgtgttctcaggtcacccctt 92
|||||||||||||||||||||||
Sbjct: 120 tttgtgttctcaggtcacccctt 142
>41800_bdi-MIR398b:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 ttgtgttctcaggtcacccctt 92
||||||||||||||||||||||
Sbjct: 100 ttgtgttctcaggtcacccctt 121
>41245_csi-MIR398:mirbase
Length = 225
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 ttgtgttctcaggtcacccctt 92
||||||||||||||||||||||
Sbjct: 131 ttgtgttctcaggtcacccctt 152
>41145_tcc-MIR398b:mirbase
Length = 165
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 ttgtgttctcaggtcacccctt 92
||||||||||||||||||||||
Sbjct: 124 ttgtgttctcaggtcacccctt 145
>41078_gra-MIR398:mirbase
Length = 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 ttgtgttctcaggtcacccctt 92
||||||||||||||||||||||
Sbjct: 65 ttgtgttctcaggtcacccctt 86
>41059_ghr-MIR398:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 ttgtgttctcaggtcacccctt 92
||||||||||||||||||||||
Sbjct: 65 ttgtgttctcaggtcacccctt 86
>40308_bol-MIR398a:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 ttgtgttctcaggtcacccctt 92
||||||||||||||||||||||
Sbjct: 70 ttgtgttctcaggtcacccctt 91
>42039_osa-MIR398a:mirbase
Length = 115
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 72 tgtgttctcaggtcacccctt 92
|||||||||||||||||||||
Sbjct: 85 tgtgttctcaggtcacccctt 105
>41445_ptc-MIR398a:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 72 tgtgttctcaggtcacccctt 92
|||||||||||||||||||||
Sbjct: 80 tgtgttctcaggtcacccctt 100
>40381_rco-MIR398a:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 72 tgtgttctcaggtcacccctt 92
|||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccctt 86
>40091_ath-MIR398c:mirbase
Length = 115
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 72 tgtgttctcaggtcacccct 91
||||||||||||||||||||
Sbjct: 85 tgtgttctcaggtcacccct 104
>40090_ath-MIR398b:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 72 tgtgttctcaggtcacccct 91
||||||||||||||||||||
Sbjct: 86 tgtgttctcaggtcacccct 105
>39882_aly-MIR398b:mirbase
Length = 142
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 72 tgtgttctcaggtcacccct 91
||||||||||||||||||||
Sbjct: 91 tgtgttctcaggtcacccct 110
