miRNEST 2.0, an integrative microRNA resource :: BLAST
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 79.8 bits (40), Expect = 6e-16
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatga 60
|||||||||||||||||||||||||| | |||| ||| ||| |||||||||||||||||
Sbjct: 11 tggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatga 70
Query: 61 attccaca 68
|| |||||
Sbjct: 71 atcccaca 78
Score = 52.0 bits (26), Expect = 1e-07
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 107 ggcttgcatacctcaggagctgcattacctga-gttgcatcatgttttggattgaaggga 165
|||||||||| |||||||||| ||||||| | ||| ||| | ||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagctttattacctaatgttagatctttttttggattgaaggga 172
Query: 166 gctcta 171
||||||
Sbjct: 173 gctcta 178
>40338_rco-MIR159:mirbase
Length = 180
Score = 79.8 bits (40), Expect = 6e-16
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatga 60
|||||||||||||||||||||||| ||| ||| | ||| ||||||||||||||||||||
Sbjct: 4 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 63
Query: 61 attccaca 68
|| |||||
Sbjct: 64 atcccaca 71
Score = 65.9 bits (33), Expect = 9e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 96 gataggcttgtggcttgcatacctcaggagctgcattacct 136
||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 99 gataggcttgtggcttgcatatctcaggagcttcattacct 139
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 96 gataggcttgtggcttgcatacctcaggagctgcatta 133
||||||||||||||||||||| ||||||||||||||||
Sbjct: 104 gataggcttgtggcttgcatatctcaggagctgcatta 141
Score = 58.0 bits (29), Expect = 2e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctga 53
|||||||||||||||||||||||| | | || || ||| ||||||||||||||
Sbjct: 9 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctga 61
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 67.9 bits (34), Expect = 2e-12
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatga 60
||||||||||||||||||||| || ||| || || ||| |||||||||||| |||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 attccacacttcta 74
|| ||||| |||||
Sbjct: 62 atcccacagttcta 75
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctcta 171
|||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctcta 173
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 67.9 bits (34), Expect = 2e-12
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatga 60
||||||||||||||||||||| || ||| || || ||| |||||||||||| |||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 attccacacttcta 74
|| ||||| |||||
Sbjct: 62 atcccacagttcta 75
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctcta 171
|||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctcta 173
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 61.9 bits (31), Expect = 1e-10
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatg 59
|||||||||||||||||||||||| | | ||||| ||| |||| ||||||| |||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 ttttggattgaagggagctcta 171
||||||||||||||||||||||
Sbjct: 153 ttttggattgaagggagctcta 174
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 61.9 bits (31), Expect = 1e-10
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatg 59
|||||||||||||||||||||||| | | ||||| ||| |||| ||||||| |||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 ttttggattgaagggagctcta 171
||||||||||||||||||||||
Sbjct: 153 ttttggattgaagggagctcta 174
>40432_gma-MIR159a:mirbase
Length = 214
Score = 60.0 bits (30), Expect = 6e-10
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatga 60
||||||||||||||||||||| || ||| || || ||| ||||||||||| |||||||
Sbjct: 21 tggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgg 80
Query: 61 attccacacttcta 74
|| ||||| |||||
Sbjct: 81 atcccacagttcta 94
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctcta 171
|||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctcta 195
>40397_ahy-MIR159:mirbase
Length = 197
Score = 56.0 bits (28), Expect = 9e-09
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatga 60
|||||||||||||||||||| ||| | | ||| | ||| |||||||||||| |||||||
Sbjct: 3 tggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatgg 62
Query: 61 attccaca 68
|| |||||
Sbjct: 63 atcccaca 70
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctcta 171
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
>42635_tae-MIR159b:mirbase
Length = 255
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 96 gataggcttgtggcttgcatacctcaggagctgcat 131
||||||||| |||||||||| || ||||||||||||
Sbjct: 175 gataggcttatggcttgcatgccccaggagctgcat 210
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctct 249
>41917_osa-MIR159a:mirbase
Length = 272
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 96 gataggcttgtggcttgcatacctcaggagctgcat 131
||||||||| |||||||||| || ||||||||||||
Sbjct: 187 gataggcttatggcttgcatgccccaggagctgcat 222
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctct 261
>41916_osa-MIR159a:mirbase
Length = 272
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 96 gataggcttgtggcttgcatacctcaggagctgcat 131
||||||||| |||||||||| || ||||||||||||
Sbjct: 187 gataggcttatggcttgcatgccccaggagctgcat 222
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctct 261
>41528_sly-MIR159:mirbase
Length = 177
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 144 atcatgttttggattgaagggagctcta 171
||||| ||||||||||||||||||||||
Sbjct: 150 atcattttttggattgaagggagctcta 177
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaa 20
>41218_csi-MIR159:mirbase
Length = 216
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 gatgataggcttgtggcttgcata 116
||||||||||||||||||||||||
Sbjct: 122 gatgataggcttgtggcttgcata 145
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 ttttggattgaagggagctcta 171
||||||||||||||||||||||
Sbjct: 185 ttttggattgaagggagctcta 206
Score = 42.1 bits (21), Expect = 1e-04
Identities = 58/69 (84%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagatgttgcta-ggttgattgagctgctgagctatg 59
|||||||||||||||||||| ||| | | | || | ||| |||||||||||||||||||
Sbjct: 12 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 71
Query: 60 aattccaca 68
|| |||||
Sbjct: 72 gatcccaca 80
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctcta 171
|||||||||||||||||||||
Sbjct: 152 tttggattgaagggagctcta 172
>40311_bra-MIR159a:mirbase
Length = 185
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctcta 171
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
>40261_bna-MIR159:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctcta 171
|||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctcta 181
>40016_ath-MIR159a:mirbase
Length = 184
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctcta 171
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
>39804_aly-MIR159a:mirbase
Length = 222
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctcta 171
|||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctcta 203
