miRNEST 2.0, an integrative microRNA resource :: BLAST
>39804_aly-MIR159a:mirbase
Length = 222
Score = 268 bits (135), Expect = 1e-72
Identities = 169/179 (94%), Gaps = 1/179 (0%)
Strand = Plus / Plus
Query: 1 gagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgga 60
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 23 gagctccttgaagttcaaacgagagttgagcagggtaaagaaaagctgctaagctatgga 82
Query: 61 tcccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgcatatc 119
||||||||||||||| ||||| | | | ||||| | |||||||||||||||||||||||
Sbjct: 83 tcccataagccctaatccttataaagaaaaaaaaggatttggttatatggcttgcatatc 142
Query: 120 tcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctc 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 tcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctc 201
>40311_bra-MIR159a:mirbase
Length = 185
Score = 250 bits (126), Expect = 3e-67
Identities = 167/177 (94%), Gaps = 4/177 (2%)
Strand = Plus / Plus
Query: 3 gctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatggatc 62
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 8 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 67
Query: 63 ccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgcatatctc 121
||||||||||||| ||||| | ||| |||||||||| ||||||||||||| ||||||||
Sbjct: 68 ccataagccctaatccttatatata--aaaaggattt-ggttatatggcttacatatctc 124
Query: 122 aggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctc 178
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 125 aggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctc 181
>40261_bna-MIR159:mirbase
Length = 183
Score = 250 bits (126), Expect = 3e-67
Identities = 167/177 (94%), Gaps = 4/177 (2%)
Strand = Plus / Plus
Query: 3 gctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatggatc 62
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 6 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 65
Query: 63 ccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgcatatctc 121
||||||||||||| ||||| | ||| |||||||||| ||||||||||||| ||||||||
Sbjct: 66 ccataagccctaatccttatatata--aaaaggattt-ggttatatggcttacatatctc 122
Query: 122 aggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctc 178
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 123 aggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctc 179
>40016_ath-MIR159a:mirbase
Length = 184
Score = 244 bits (123), Expect = 2e-65
Identities = 167/179 (93%), Gaps = 2/179 (1%)
Strand = Plus / Plus
Query: 1 gagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgga 60
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 4 gagctccttaaagttcaaacatgagttgagcagggtaaagaaaagctgctaagctatgga 63
Query: 61 tcccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgcatatc 119
||||||||||||||| |||| | | ||||||||||| |||||||||| |||||||||
Sbjct: 64 tcccataagccctaatccttgtaaagtaaaaaaggattt-ggttatatggattgcatatc 122
Query: 120 tcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctc 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctc 181
>39805_aly-MIR159b:mirbase
Length = 202
Score = 111 bits (56), Expect = 2e-25
Identities = 151/179 (84%), Gaps = 9/179 (5%)
Strand = Plus / Plus
Query: 1 gagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgga 60
||||||||| |||||||| ||| |||||||||||||||| |||||||||||||||||||
Sbjct: 17 gagctccttgaagttcaatggagggtttagcagggtaaagtaaagctgctaagctatgga 76
Query: 61 tcccataagccctaaccttaaacatagaaaaaggattttggttatatggcttgcatatct 120
|||||||| || || | ||| | || ||||||| || ||||| || |||||||
Sbjct: 77 tcccataaacctta---tcaaattcaaaataaggatt----ttttatggattccatatct 129
Query: 121 caggagctttaactt-gccctttaatggcttttactcttctttggattgaagggagctc 178
|||||||||| |||| |||||||||||| || ||||||||||||||||||||||||||
Sbjct: 130 caggagctttcacttacccctttaatggc-ttcactcttctttggattgaagggagctc 187
>40017_ath-MIR159b:mirbase
Length = 196
Score = 93.7 bits (47), Expect = 4e-20
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 1 gagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgga 60
||||||||| |||||||| ||| |||||||||||| ||| |||||||||||||||||||
Sbjct: 5 gagctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatgga 64
Query: 61 tcccataagcc 71
|||||||||||
Sbjct: 65 tcccataagcc 75
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 108 ggcttgcatatctcaggagcttta 131
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 aagctgctaagctatggatcc 63
|||||||||||||||||||||
Sbjct: 54 aagctgctaagctatggatcc 74
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 108 ggcttgcatatctcaggagcttta 131
||||||||||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagcttta 136
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 108 ggcttgcatatctcaggagcttta 131
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 aagctgctaagctatggatcc 63
|||||||||||||||||||||
Sbjct: 54 aagctgctaagctatggatcc 74
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 156 cttctttggattgaagggagctc 178
|||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctc 171
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 156 cttctttggattgaagggagctc 178
|||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctc 171
>40432_gma-MIR159a:mirbase
Length = 214
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 156 cttctttggattgaagggagctc 178
|||||||||||||||||||||||
Sbjct: 171 cttctttggattgaagggagctc 193
>40338_rco-MIR159:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 107 tggcttgcatatctcaggagctt 129
|||||||||||||||||||||||
Sbjct: 109 tggcttgcatatctcaggagctt 131
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 107 tggcttgcatatctcaggagct 128
||||||||||||||||||||||
Sbjct: 114 tggcttgcatatctcaggagct 135
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 ttctttggattgaagggagctc 178
||||||||||||||||||||||
Sbjct: 149 ttctttggattgaagggagctc 170
>40397_ahy-MIR159:mirbase
Length = 197
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 agctgctaagctatggatccca 65
||||||||||||||||||||||
Sbjct: 47 agctgctaagctatggatccca 68
>42695_zma-MIR159f:mirbase
Length = 215
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctc 212
>42690_zma-MIR159a:mirbase
Length = 246
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctc 225
>42635_tae-MIR159b:mirbase
Length = 255
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctc 248
>42494_sbi-MIR159:mirbase
Length = 226
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 202 tctttggattgaagggagctc 222
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 221 tctttggattgaagggagctc 241
>42455_sof-MIR159d:mirbase
Length = 265
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctc 244
>42453_sof-MIR159b:mirbase
Length = 266
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctc 245
>42452_sof-MIR159a:mirbase
Length = 265
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctc 244
>41918_osa-MIR159b:mirbase
Length = 188
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctc 176
>41917_osa-MIR159a:mirbase
Length = 272
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctc 260
>41916_osa-MIR159a:mirbase
Length = 272
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctc 260
>41868_far-MIR159:mirbase
Length = 200
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 167 tctttggattgaagggagctc 187
