miRNEST 2.0, an integrative microRNA resource :: BLAST
>40342_rco-MIR162:mirbase
Length = 101
Score = 79.8 bits (40), Expect = 3e-16
Identities = 82/92 (89%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctggagattttttgttctg-aactgcaat-aaa 58
|||||||||||||||||||||||||||||||| | ||||||| || ||| ||| |||
Sbjct: 5 tggaggcagcggttcatcgatctcttcctgga-agattttgttgtgaaacaaaaataaaa 63
Query: 59 cacatgaatcgatcgataaacctctgcatcca 90
| ||||||||||||||||||||||||||||||
Sbjct: 64 cgcatgaatcgatcgataaacctctgcatcca 95
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 69.9 bits (35), Expect = 3e-13
Identities = 80/91 (87%), Gaps = 3/91 (3%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctggagattttttgttctga-actgcaataaac 59
|||||||||||||||||||||||||||||| ||| |||| ||| ||| | | | |||
Sbjct: 25 tggaggcagcggttcatcgatctcttcctg-agaatttt-gttgtgagaataacacaaat 82
Query: 60 acatgaatcgatcgataaacctctgcatcca 90
|||||||||||||||||||||||||||||||
Sbjct: 83 acatgaatcgatcgataaacctctgcatcca 113
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctggagatttttt 40
||||||||||||||||||||||| |||||| |||||||||
Sbjct: 12 tggaggcagcggttcatcgatcttttcctgaagatttttt 51
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctggagatttttt 40
||||||||||||||||||||||| |||||| |||||||||
Sbjct: 12 tggaggcagcggttcatcgatcttttcctgaagatttttt 51
>41090_tcc-MIR162:mirbase
Length = 131
Score = 63.9 bits (32), Expect = 2e-11
Identities = 78/91 (85%), Gaps = 3/91 (3%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctggagattttttgttctga-actgcaataaac 59
||||||||||||||||||||||||||||||| | ||||||| ||| | | | |||
Sbjct: 22 tggaggcagcggttcatcgatctcttcctgggaa--ttttgttgtgagaataacacaaat 79
Query: 60 acatgaatcgatcgataaacctctgcatcca 90
|||||| ||||||||||||||||||||||||
Sbjct: 80 acatgattcgatcgataaacctctgcatcca 110
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgg 31
|||||||||||||||||||||||||||||||
Sbjct: 12 tggaggcagcggttcatcgatctcttcctgg 42
>41220_csi-MIR162:mirbase
Length = 201
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 60 acatgaatcgatcgataaacctctgcatcca 90
|||||||||||||||||||||||||||||||
Sbjct: 150 acatgaatcgatcgataaacctctgcatcca 180
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgg 31
|||||||||||||||||||||||||||||||
Sbjct: 14 tggaggcagcggttcatcgatctcttcctgg 44
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 60 acatgaatcgatcgataaacctctgcatcca 90
|||||||||||||||||||||||||||||||
Sbjct: 69 acatgaatcgatcgataaacctctgcatcca 99
>39812_aly-MIR162a:mirbase
Length = 228
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgg 31
|||||||||||||||||||||||||||||||
Sbjct: 69 tggaggcagcggttcatcgatctcttcctgg 99
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 61 catgaatcgatcgataaacctctgcatcca 90
||||||| ||||||||||||||||||||||
Sbjct: 126 catgaatagatcgataaacctctgcatcca 155
>40437_gma-MIR162:mirbase
Length = 102
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 61 catgaatcgatcgataaacctctgcatcca 90
||||||||||||||||||||||||||||||
Sbjct: 63 catgaatcgatcgataaacctctgcatcca 92
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
|||| |||||||||||||||||||||||||
Sbjct: 11 tggatgcagcggttcatcgatctcttcctg 40
>40024_ath-MIR162a:mirbase
Length = 140
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 26 tggaggcagcggttcatcgatctcttcctg 55
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 61 catgaatcgatcgataaacctctgcatcca 90
||||||| ||||||||||||||||||||||
Sbjct: 79 catgaatagatcgataaacctctgcatcca 108
>39813_aly-MIR162b:mirbase
Length = 184
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 61 catgaatcgatcgataaacctctgcatcca 90
||||||||||||||||||||||||||||||
Sbjct: 103 catgaatcgatcgataaacctctgcatcca 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 51 tggaggcagcggttcatcgatc 72
>42502_sbi-MIR162:mirbase
Length = 127
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 64 gaatcgatcgataaacctctgcatcca 90
|||||||||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatcca 126
>41929_osa-MIR162a:mirbase
Length = 171
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 64 gaatcgatcgataaacctctgcatcca 90
|||||||||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatcca 162
>40663_mtr-MIR162:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 60 acatgaatcgatcgataaacctctgcatcca 90
|||||||||| ||||||||||||||||||||
Sbjct: 76 acatgaatcggtcgataaacctctgcatcca 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
|||| |||||||||||||||||| ||||||
Sbjct: 22 tggatgcagcggttcatcgatctgttcctg 51
>40025_ath-MIR162b:mirbase
Length = 111
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 64 gaatcgatcgataaacctctgcatcca 90
|||||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatcca 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 13 tggaggcagcggttcatcgatc 34
>41736_bdi-MIR162:mirbase
Length = 133
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 64 gaatcgatcgataaacctctgcatcc 89
||||||||||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
>41578_vvi-MIR162:mirbase
Length = 103
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
|||| |||||||||||||||||||||||||
Sbjct: 10 tggatgcagcggttcatcgatctcttcctg 39
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 64 gaatcgatcgataaacctctgcatcca 90
|||||| ||||||||||||||||||||
Sbjct: 66 gaatcggtcgataaacctctgcatcca 92
>42708_zma-MIR162:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 64 gaatcgatcgataaacctctgcatcca 90
|||||| ||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatcca 129
>41930_osa-MIR162b:mirbase
Length = 134
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 64 gaatcgatcgataaacctctgcatcca 90
|||||||||||||| ||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatcca 123
>41530_sly-MIR162:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 64 gaatcgatcgataaacctctgcatcca 90
|||||| ||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatcca 98
