miRNEST 2.0, an integrative microRNA resource :: BLAST
>40024_ath-MIR162a:mirbase
Length = 140
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctgtg 33
|||||||||||||||||||||||||||||||||
Sbjct: 25 ctggaggcagcggttcatcgatctcttcctgtg 57
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 74 taaaagcacgaacagatcgataaacctctgcatccag 110
|||||||| ||| ||||||||||||||||||||||||
Sbjct: 73 taaaagcatgaatagatcgataaacctctgcatccag 109
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatctcttcctg 41
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 83 gaacagatcgataaacctctgcatccag 110
|||| |||||||||||||||||||||||
Sbjct: 71 gaaccgatcgataaacctctgcatccag 98
>41090_tcc-MIR162:mirbase
Length = 131
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||||||||||
Sbjct: 21 ctggaggcagcggttcatcgatctcttcctg 51
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 88 gatcgataaacctctgcatccag 110
|||||||||||||||||||||||
Sbjct: 89 gatcgataaacctctgcatccag 111
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||||||||||
Sbjct: 24 ctggaggcagcggttcatcgatctcttcctg 54
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 88 gatcgataaacctctgcatccag 110
|||||||||||||||||||||||
Sbjct: 92 gatcgataaacctctgcatccag 114
>40342_rco-MIR162:mirbase
Length = 101
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||||||||||
Sbjct: 4 ctggaggcagcggttcatcgatctcttcctg 34
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 88 gatcgataaacctctgcatccag 110
|||||||||||||||||||||||
Sbjct: 74 gatcgataaacctctgcatccag 96
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||||||||||
Sbjct: 13 ctggaggcagcggttcatcgatctcttcctg 43
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 88 gatcgataaacctctgcatccag 110
|||||||||||||||||||||||
Sbjct: 78 gatcgataaacctctgcatccag 100
>39812_aly-MIR162a:mirbase
Length = 228
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||||||||||
Sbjct: 68 ctggaggcagcggttcatcgatctcttcctg 98
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 75 aaaagcacgaacagatcgataaacctctgcatccag 110
||||||| ||| ||||||||||||||||||||||||
Sbjct: 121 aaaagcatgaatagatcgataaacctctgcatccag 156
>41578_vvi-MIR162:mirbase
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
||||| |||||||||||||||||||||||||
Sbjct: 9 ctggatgcagcggttcatcgatctcttcctg 39
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 90 tcgataaacctctgcatccag 110
|||||||||||||||||||||
Sbjct: 73 tcgataaacctctgcatccag 93
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||| ||||||
Sbjct: 11 ctggaggcagcggttcatcgatcttttcctg 41
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 80 cacgaacagatcgataaacctctgcatccag 110
||||||| |||||||||||||||||||||||
Sbjct: 68 cacgaaccgatcgataaacctctgcatccag 98
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||| ||||||
Sbjct: 11 ctggaggcagcggttcatcgatcttttcctg 41
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 80 cacgaacagatcgataaacctctgcatccag 110
||||||| |||||||||||||||||||||||
Sbjct: 68 cacgaaccgatcgataaacctctgcatccag 98
>40437_gma-MIR162:mirbase
Length = 102
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
||||| |||||||||||||||||||||||||
Sbjct: 10 ctggatgcagcggttcatcgatctcttcctg 40
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 88 gatcgataaacctctgcatccag 110
|||||||||||||||||||||||
Sbjct: 71 gatcgataaacctctgcatccag 93
>40025_ath-MIR162b:mirbase
Length = 111
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctgtg 33
||||||||||||||||||||||| ||||||||
Sbjct: 12 ctggaggcagcggttcatcgatcaattcctgtg 44
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 75 aaaagcacgaacagatcgataaacctctgcatccag 110
||||||| ||| |||||||||||||||||||||||
Sbjct: 64 aaaagcaagaatcgatcgataaacctctgcatccag 99
>39813_aly-MIR162b:mirbase
Length = 184
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctgtg 33
||||||||||||||||||||||| ||||||||
Sbjct: 50 ctggaggcagcggttcatcgatcaattcctgtg 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 75 aaaagcacgaacagatcgataaacctctgcatccag 110
||||||| ||| |||||||||||||||||||||||
Sbjct: 98 aaaagcatgaatcgatcgataaacctctgcatccag 133
>42502_sbi-MIR162:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 88 gatcgataaacctctgcatccag 110
|||||||||||||||||||||||
Sbjct: 105 gatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 88 gatcgataaacctctgcatccag 110
|||||||||||||||||||||||
Sbjct: 141 gatcgataaacctctgcatccag 163
>41220_csi-MIR162:mirbase
Length = 201
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 89 ctggaggcagcggttcatcgatc 111
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 88 gatcgataaacctctgcatccag 110
|||||||||||||||||||||||
Sbjct: 159 gatcgataaacctctgcatccag 181
>40663_mtr-MIR162:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
||||| |||||||||||||||||| ||||||
Sbjct: 21 ctggatgcagcggttcatcgatctgttcctg 51
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 90 tcgataaacctctgcatccag 110
|||||||||||||||||||||
Sbjct: 87 tcgataaacctctgcatccag 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 83 gaacagatcgataaacctctgcatccag 110
|||||||||||| |||| ||||||||||
Sbjct: 48 gaacagatcgatgaaccgctgcatccag 21
>42708_zma-MIR162:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 90 tcgataaacctctgcatccag 110
|||||||||||||||||||||
Sbjct: 110 tcgataaacctctgcatccag 130
>41736_bdi-MIR162:mirbase
Length = 133
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 88 gatcgataaacctctgcatcc 108
|||||||||||||||||||||
Sbjct: 109 gatcgataaacctctgcatcc 129
>41530_sly-MIR162:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 90 tcgataaacctctgcatccag 110
|||||||||||||||||||||
Sbjct: 79 tcgataaacctctgcatccag 99
