miRNEST 2.0, an integrative microRNA resource :: BLAST
>41218_csi-MIR159:mirbase
Length = 216
Score = 75.8 bits (38), Expect = 9e-15
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggattttgc-agggtaaatcaagctgctgatctatgg 59
||||||||||||||||||||||||| | | || ||||||||| ||||||||| ||||||
Sbjct: 13 ggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgg 72
Query: 60 attccacagtccta 73
|| |||||||||||
Sbjct: 73 atcccacagtccta 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 144 ctttctttggattgaagggagctct 168
|||| ||||||||||||||||||||
Sbjct: 181 ctttttttggattgaagggagctct 205
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 65.9 bits (33), Expect = 9e-12
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgga 60
||||||||||||||||||| ||||| | |||| ||||| || |||||||| | |||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 61 ttccacagtccta 73
||||||||||||
Sbjct: 72 -tccacagtccta 83
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 91 ggataggcttgcggcttgcatatgttaggagctttatt 128
||||||| ||||||||||||||| | ||||||||||||
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagctttatt 134
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 65.9 bits (33), Expect = 9e-12
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 100 tgcggcttgcatatgttaggagctttattacctctttgttttatctttctttggattgaa 159
|||||||||||||| | |||||||||||||||| |||| |||||| |||||||||||
Sbjct: 110 tgcggcttgcatatctcaggagctttattacct-aatgttagatctttttttggattgaa 168
Query: 160 gggagctct 168
|||||||||
Sbjct: 169 gggagctct 177
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 65.9 bits (33), Expect = 9e-12
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgga 60
||||||||||||||||||| ||||| | |||| ||||| || |||||||| | |||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 61 ttccacagtccta 73
||||||||||||
Sbjct: 72 -tccacagtccta 83
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 91 ggataggcttgcggcttgcatatgttaggagctttatt 128
||||||| ||||||||||||||| | ||||||||||||
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagctttatt 134
>40338_rco-MIR159:mirbase
Length = 180
Score = 65.9 bits (33), Expect = 9e-12
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgga 60
||||||||||||||||||| ||||||| ||| ||||| || ||||||||| |||||||
Sbjct: 5 ggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgga 64
Query: 61 ttccacagtccta 73
| |||||| ||||
Sbjct: 65 tcccacagcccta 77
Score = 60.0 bits (30), Expect = 6e-10
Identities = 67/78 (85%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 91 ggataggcttgcggcttgcatatgttaggagctttattacctctttgttttatctttctt 150
||||||||||| ||||||||||| | |||||||| ||||||| | | || ||| || ||
Sbjct: 98 ggataggcttgtggcttgcatatctcaggagcttcattacct-tgtattagatccttgtt 156
Query: 151 tggattgaagggagctct 168
||||||||||||||||||
Sbjct: 157 tggattgaagggagctct 174
>41528_sly-MIR159:mirbase
Length = 177
Score = 60.0 bits (30), Expect = 6e-10
Identities = 58/65 (89%), Gaps = 3/65 (4%)
Strand = Plus / Plus
Query: 106 ttgcatatgttaggagctttatt--acctctttgttttatctttctttggattgaaggga 163
|||||||||| |||||||||||| ||| |||||||| ||| || |||||||||||||||
Sbjct: 113 ttgcatatgtcaggagctttattttacc-ctttgtttgatcattttttggattgaaggga 171
Query: 164 gctct 168
|||||
Sbjct: 172 gctct 176
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 56.0 bits (28), Expect = 9e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 137 gttttatctttctttggattgaagggagctct 168
|||| |||||||||||||||||||||||||||
Sbjct: 140 gtttaatctttctttggattgaagggagctct 171
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 50.1 bits (25), Expect = 5e-07
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgga 60
||||||||||||||||||| ||||| | || | ||||| || ||||||||| ||||||
Sbjct: 10 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 69
Query: 61 ttccacagtccta 73
| |||||| ||||
Sbjct: 70 tcccacagcccta 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 91 ggataggcttgcggcttgcatatgttaggagct 123
||||||||||| ||||||||||| | |||||||
Sbjct: 103 ggataggcttgtggcttgcatatctcaggagct 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 tttggattgaagggagctct 168
||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctct 179
>40432_gma-MIR159a:mirbase
Length = 214
Score = 50.1 bits (25), Expect = 5e-07
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgga 60
||||||||||||||||||| |||||| || | |||| ||| ||||||| | |||||||
Sbjct: 22 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 81
Query: 61 ttccacagt 69
| |||||||
Sbjct: 82 tcccacagt 90
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 146 ttctttggattgaagggagctct 168
|||||||||||||||||||||||
Sbjct: 172 ttctttggattgaagggagctct 194
>40397_ahy-MIR159:mirbase
Length = 197
Score = 50.1 bits (25), Expect = 5e-07
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgga 60
||||||||||||||||||| ||||| | ||| ||||| || ||||||| | |||||||
Sbjct: 4 ggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatgga 63
Query: 61 ttccacagt 69
| |||||||
Sbjct: 64 tcccacagt 72
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 tttggattgaagggagctct 168
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 146 ttctttggattgaagggagctct 168
|||||||||||||||||||||||
Sbjct: 150 ttctttggattgaagggagctct 172
Score = 42.1 bits (21), Expect = 1e-04
Identities = 57/69 (82%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgga 60
||||||||||||||||||| |||||| || | |||| || ||||||| | |||||||
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 ttccacagt 69
| |||||||
Sbjct: 63 tcccacagt 71
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 146 ttctttggattgaagggagctct 168
|||||||||||||||||||||||
Sbjct: 150 ttctttggattgaagggagctct 172
Score = 42.1 bits (21), Expect = 1e-04
Identities = 57/69 (82%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgga 60
||||||||||||||||||| |||||| || | |||| || ||||||| | |||||||
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 ttccacagt 69
| |||||||
Sbjct: 63 tcccacagt 71
>40311_bra-MIR159a:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 146 ttctttggattgaagggagctct 168
|||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctct 182
>40261_bna-MIR159:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 146 ttctttggattgaagggagctct 168
|||||||||||||||||||||||
Sbjct: 158 ttctttggattgaagggagctct 180
>40017_ath-MIR159b:mirbase
Length = 196
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 146 ttctttggattgaagggagctct 168
|||||||||||||||||||||||
Sbjct: 165 ttctttggattgaagggagctct 187
>40016_ath-MIR159a:mirbase
Length = 184
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 146 ttctttggattgaagggagctct 168
|||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctct 182
>39805_aly-MIR159b:mirbase
Length = 202
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 146 ttctttggattgaagggagctct 168
|||||||||||||||||||||||
Sbjct: 166 ttctttggattgaagggagctct 188
Score = 42.1 bits (21), Expect = 1e-04
Identities = 52/61 (85%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 2 gagctccttgaagtccaaaagaggattttgcagggtaaa-tcaagctgctgatctatgga 60
|||||||||||||| ||| |||| ||| |||||||||| | |||||||| | |||||||
Sbjct: 17 gagctccttgaagttcaatggagggtttagcagggtaaagtaaagctgctaagctatgga 76
Query: 61 t 61
|
Sbjct: 77 t 77
>39804_aly-MIR159a:mirbase
Length = 222
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 146 ttctttggattgaagggagctct 168
|||||||||||||||||||||||
Sbjct: 180 ttctttggattgaagggagctct 202
>42695_zma-MIR159f:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 tctttggattgaagggagctct 168
||||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctct 213
>42690_zma-MIR159a:mirbase
Length = 246
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 tctttggattgaagggagctct 168
||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226
